Patrick Müller

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 21

Top Topics

Dna Methylation

Gene Expression

Bone Regeneration

Top Venues

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Paul Knabl, Alexandra Schauer, Autumn P Pomreinke, Bob Zimmermann, Katherine W Rogers, Daniel Čapek, Patrick Müller, Grigory Genikhovich
Analysis of SMAD1/5 target genes in a sea anemone reveals ZSWIM4-6 as a novel BMP signaling modulator. eLife 13 (2024)
Autumn Penecilla Pomreinke, Patrick Müller
Zebrafish nampt-a mutants are viable despite perturbed primitive hematopoiesis. Hereditas 161 (1) (2024)
Paul Knabl, Alexandra Schauer, Autumn P Pomreinke, Bob Zimmermann, Katherine W Rogers, Daniel Čapek, Patrick Müller, Grigory Genikhovich
Analysis of SMAD1/5 target genes in a sea anemone reveals ZSWIM4-6 as a novel BMP signaling modulator. eLife 13 (2024)
Paul Knabl, Alexandra Schauer, Autumn P Pomreinke, Bob Zimmermann, Katherine W Rogers, Daniel Čapek, Patrick Müller, Grigory Genikhovich
Analysis of SMAD1/5 target genes in a sea anemone reveals ZSWIM4-6 as a novel BMP signaling modulator. eLife 13 (2024)
Autumn Penecilla Pomreinke, Patrick Müller
Zebrafish nampt-a mutants are viable despite perturbed primitive hematopoiesis. Hereditas 161 (1) (2024)
Daniel Čapek, Matvey Safroshkin, Hernán Andrés Morales-Navarrete, Nikan Toulany, Grigory Arutyunov, Anica Kurzbach, Johanna Bihler, Julia Hagauer, Sebastian Kick, Felicity Jones, Ben Jordan, Patrick Müller
EmbryoNet: using deep learning to link embryonic phenotypes to signaling pathways. Nature methods (2023)
Nikan Toulany, Hernán Andrés Morales-Navarrete, Daniel Čapek, Jannis Grathwohl, Murat Ünalan, Patrick Müller
Uncovering developmental time and tempo using deep learning. Nature methods (2023)
Timo Kuhn, Amit N Landge, David Mörsdorf, Jonas Coßmann, Johanna Gerstenecker, Daniel Čapek, Patrick Müller, J Christof M Gebhardt
Single-molecule tracking of Nodal and Lefty in live zebrafish embryos supports hindered diffusion model. Nature communications 13 (1) (2022)
Hannes Preiß, Anna C Kögler, David Mörsdorf, Daniel Čapek, Gary H Soh, Katherine W Rogers, Hernán Andrés Morales-Navarrete, María Almuedo-Castillo, Patrick Müller
Regulation of Nodal signaling propagation by receptor interactions and positive feedback. eLife 11 (2022)
Julia Skokowa, Birte Hernandez Alvarez, Murray Coles, Malte Ritter, Masoud Nasri, Jérémy Haaf, Narges Aghaallaei, Yun Xu, Perihan Mir, Ann-Christin Krahl, Katherine W Rogers, Kateryna Maksymenko, Baubak Bajoghli, Karl Welte, Andrei N Lupas, Patrick Müller, Mohammad ElGamacy
A topological refactoring design strategy yields highly stable granulopoietic proteins. Nature communications 13 (1) (2022)
Birte Hernandez Alvarez, Julia Skokowa, Murray Coles, Perihan Mir, Masoud Nasri, Kateryna Maksymenko, Laura Weidmann, Katherine W Rogers, Karl Welte, Andrei N Lupas, Patrick Müller, Mohammad ElGamacy
Design of novel granulopoietic proteins by topological rescaffolding. PLoS biology 18 (12) (2020)
Katherine W Rogers, Mohammad ElGamacy, Benjamin M Jordan, Patrick Müller
Optogenetic investigation of BMP target gene expression diversity. eLife 9 (2020)
Tatsuya Morishima, Ann-Christin Krahl, Masoud Nasri, Yun Xu, Narges Aghaallaei, Betül Findik, Maksim Klimiankou, Malte Ritter, Marcus D Hartmann, Christian Johannes Gloeckner, Sylwia Anna Stefańczyk, Christian Lindner, Benedikt Oswald, Regine Bernhard, Karin Hähnel, Ursula Hermanutz-Klein, Martin Ebinger, Rupert Handgretinger, Nicolas Casadei, Karl Welte, Maya Andre, Patrick Müller, Baubak Bajoghli, Julia Skokowa
LMO2 activation by deacetylation is indispensable for hematopoiesis and T-ALL leukemogenesis. Blood 134 (14) (2019)
Daniel Čapek, Patrick Müller
Positional information and tissue scaling during development and regeneration. Development (Cambridge, England) 146 (24) (2019)
Karin D Prummel, Christopher Hess, Susan Nieuwenhuize, Hugo J Parker, Katherine W Rogers, Iryna Kozmikova, Claudia Racioppi, Eline C Brombacher, Anna Czarkwiani, Dunja Knapp, Sibylle Burger, Elena Chiavacci, Gopi Shah, Alexa Burger, Jan Huisken, Maximina Hee Yun, Lionel A Christiaen, Zbynek Kozmik, Patrick Müller, Marianne Bronner, Robb Krumlauf, Christian Mosimann
A conserved regulatory program initiates lateral plate mesoderm emergence across chordates. Nature communications 10 (1) (2019)
María Almuedo-Castillo, Alexander Bläßle, David Mörsdorf, Luciano Marcon, Gary H Soh, Katherine W Rogers, Alexander F Schier, Patrick Müller
Scale-invariant patterning by size-dependent inhibition of Nodal signalling. Nature cell biology 20 (9) (2018)
David Mörsdorf, Patrick Müller
Tuning Protein Diffusivity with Membrane Tethers. Biochemistry 58 (3) (2018)
Anassuya Ramachandran, Pedro Vizán, Debipriya Das, Probir Chakravarty, Janis Vogt, Katherine W Rogers, Patrick Müller, Andrew P Hinck, Gopal P Sapkota, Caroline S Hill
TGF-β uses a novel mode of receptor activation to phosphorylate SMAD1/5 and induce epithelial-to-mesenchymal transition. eLife 7 (2018)
Indre Piragyte, Thomas Clapes, Aikaterini Polyzou, Ramon I Klein Geltink, Stylianos Lefkopoulos, Na Yin, Pierre Cauchy, Jonathan D Curtis, Lhéanna Klaeylé, Xavier Langa, Cora C A Beckmann, Marcin W Wlodarski, Patrick Müller, Dominic Van Essen, Angelika Rambold, Friedrich G Kapp, Maria Caterina Mione, Joerg M Buescher, Erika L Pearce, Alexander P Polyzos, Eirini Trompouki
A metabolic interplay coordinated by HLX regulates myeloid differentiation and AML through partly overlapping pathways. Nature communications 9 (1) (2018)
Autumn P Pomreinke, Gary H Soh, Katherine W Rogers, Jennifer K Bergmann, Alexander J Bläßle, Patrick Müller
Dynamics of BMP signaling and distribution during zebrafish dorsal-ventral patterning. eLife 6 (2017)
Luciano Marcon, Xavier Diego, James Sharpe, Patrick Müller
High-throughput mathematical analysis identifies Turing networks for patterning with equally diffusing signals. eLife 5 (2016)