Qixin He

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 37

Top Venues

Nature communications

medRxiv : the preprint server for health sciences

eLife

Communications medicine

University of Chicago

University of Michigan (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Chicago Apr 01 2015

United States

postdoc :: Ecology and Evolution

Education History

University of Michigan Sep 01 2008 - Dec 14 2014

United States

PHD :: Ecology and Evolutionary Biology

Publications

Pavel B Klimov, Qixin He
Predicting host range expansion in parasitic mites using a global mammalian-acarine dataset. Nature communications 15 (1) (2024)
Pavel B Klimov, Qixin He
Predicting host range expansion in parasitic mites using a global mammalian-acarine dataset. Nature communications 15 (1) (2024)
Qi Zhang, Qixin He, Kathryn E Tiedje, Karen P Day, Mercedes Pascual
Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria. Nature communications 15 (1) (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia. Communications medicine 4 (1) (2024)
Ilinca I Ciubotariu, Bradley K Broyles, Shaojun Xie, Jyothi Thimmapuram, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Japhet Matoba, Jessica L Schue, William J Moss, Daniel J Bridges, Qixin He, Giovanna Carpi
Diversity and selection analyses identify transmission-blocking antigens as the optimal vaccine candidates in Plasmodium falciparum . medRxiv : the preprint server for health sciences (2024)
Qi Zhang, Qixin He, Kathryn E Tiedje, Karen P Day, Mercedes Pascual
Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria. Nature communications 15 (1) (2024)
Nianqiao P Ju, Jiawei Liu, Qixin He
SNP-slice resolves mixed infections: simultaneously unveiling strain haplotypes and linking them to hosts. Bioinformatics (Oxford, England) 40 (6) (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and population differentiation in Zambia and bordering countries. medRxiv : the preprint server for health sciences (2024)
Qi Zhang, Qixin He, Kathryn E Tiedje, Karen P Day, Mercedes Pascual
Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria. Nature communications 15 (1) (2024)
Nianqiao P Ju, Jiawei Liu, Qixin He
SNP-slice resolves mixed infections: simultaneously unveiling strain haplotypes and linking them to hosts. Bioinformatics (Oxford, England) 40 (6) (2024)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance. eLife 12 (2024)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance. eLife 12 (2024)
Qi Zhang, Qixin He, Kathryn E Tiedje, Karen P Day, Mercedes Pascual
Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria. Nature communications 15 (1) (2024)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance. eLife 12 (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia. Communications medicine 4 (1) (2024)
Ilinca I Ciubotariu, Bradley K Broyles, Shaojun Xie, Jyothi Thimmapuram, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Japhet Matoba, Jessica L Schue, William J Moss, Daniel J Bridges, Qixin He, Giovanna Carpi
Diversity and selection analyses identify transmission-blocking antigens as the optimal vaccine candidates in Plasmodium falciparum . medRxiv : the preprint server for health sciences (2024)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance. eLife 12 (2024)
Qi Zhang, Qixin He, Kathryn E Tiedje, Karen P Day, Mercedes Pascual
Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria. Nature communications 15 (1) (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and population differentiation in Zambia and bordering countries. medRxiv : the preprint server for health sciences (2024)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance. eLife 12 (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia. Communications medicine 4 (1) (2024)
Nianqiao P Ju, Jiawei Liu, Qixin He
SNP-slice resolves mixed infections: simultaneously unveiling strain haplotypes and linking them to hosts. Bioinformatics (Oxford, England) 40 (6) (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and population differentiation in Zambia and bordering countries. medRxiv : the preprint server for health sciences (2024)
Pavel B Klimov, Qixin He
Predicting host range expansion in parasitic mites using a global mammalian-acarine dataset. Nature communications 15 (1) (2024)
Ilinca I Ciubotariu, Bradley K Broyles, Shaojun Xie, Jyothi Thimmapuram, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Japhet Matoba, Jessica L Schue, William J Moss, Daniel J Bridges, Qixin He, Giovanna Carpi
Diversity and selection analyses identify transmission-blocking antigens as the optimal vaccine candidates in Plasmodium falciparum . medRxiv : the preprint server for health sciences (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia. Communications medicine 4 (1) (2024)
Abebe A Fola, Qixin He, Shaojun Xie, Jyothi Thimmapuram, Ketaki P Bhide, Jack Dorman, Ilinca I Ciubotariu, Mulenga C Mwenda, Brenda Mambwe, Conceptor Mulube, Moonga Hawela, Douglas E Norris, William J Moss, Daniel J Bridges, Giovanna Carpi
Genomics reveals heterogeneous Plasmodium falciparum transmission and population differentiation in Zambia and bordering countries. medRxiv : the preprint server for health sciences (2024)
Luiz Gustavo A Pedroso, Pavel B Klimov, Sergey V Mironov, Barry M OConnor, Henk R Braig, Almir R Pepato, Kevin P Johnson, Qixin He, Fabio Akashi Hernandes
Horizontal transmission maintains host specificity and codiversification of symbionts in a brood parasitic host. Communications biology 6 (1) (2023)
Qixin He, John K Chaillet, Frédéric Labbé
Antigenic strain diversity predicts different biogeographic patterns of invasion and maintenance of anti-malarial drug resistance. bioRxiv : the preprint server for biology (2023)
André M de Roos, Qixin He, Mercedes Pascual
An immune memory-structured SIS epidemiological model for hyperdiverse pathogens. Proceedings of the National Academy of Sciences of the United States of America 120 (45) (2023)
Qixin He, Shai Pilosof, Kathryn E Tiedje, Karen Patricia Day, Mercedes Pascual
Frequency-Dependent Competition Between Strains Imparts Persistence to Perturbations in a Model of Plasmodium falciparum Malaria Transmission. Frontiers in ecology and evolution 9 (2021)
Rahul Subramanian, Qixin He, Mercedes Pascual
Quantifying asymptomatic infection and transmission of COVID-19 in New York City using observed cases, serology, and testing capacity. Proceedings of the National Academy of Sciences of the United States of America 118 (9) (2021)
Qixin He, Mercedes Pascual
An antigenic diversification threshold for falciparum malaria transmission at high endemicity. PLoS computational biology 17 (2) (2021)
Andréa T Thomaz, Qixin He
When are populations not connected like a circuit? Identifying biases in gene flow from coalescent times. Molecular ecology resources 19 (6) (2020)
Jiaqi Tan, Qixin He, Jennifer T Pentz, Cheng Peng, Xian Yang, Meng-Hsiu Tsai, Yongsheng Chen, William C Ratcliff, Lin Jiang
Copper oxide nanoparticles promote the evolution of multicellularity in yeast. Nanotoxicology 13 (5) (2019)
Qixin He, Shai Pilosof, Kathryn E Tiedje, Shazia Ruybal-Pesántez, Yael Artzy-Randrup, Edward B Baskerville, Karen P Day, Mercedes Pascual
Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum. Nature communications 9 (1) (2018)
Qixin He, Joyce R Prado, Laura Lacey Knowles
Inferring the geographic origin of a range expansion: Latitudinal and longitudinal coordinates inferred from genomic data in an ABC framework with the program x-origin. Molecular ecology 26 (24) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Qixin He