Ravi Radhakrishnan

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Topics

Density Functional Theory

Tyrosine Kinase

Circulating Tumor

Acute Lymphoblastic Leukemia

Top Venues

Nature communications

Journal of personalized medicine

Computation (Basel, Switzerland)

ACS applied bio materials

This page only lists publications with an associated author ORCID identifier.

Publications

Eleni Kolokotroni, Daniel Abler, Alokendra Ghosh, Eleftheria Tzamali, James Grogan, Eleni Georgiadi, Philippe Büchler, Ravi Radhakrishnan, Helen Byrne, Vangelis Sakkalis, Katerina Nikiforaki, Ioannis Karatzanis, Nigel J B McFarlane, Djibril Kaba, Feng Dong, Rainer M Bohle, Eckart Meese, Norbert Graf, Georgios S Stamatakos, null null
A Multidisciplinary Hyper-Modeling Scheme in Personalized In Silico Oncology: Coupling Cell Kinetics with Metabolism, Signaling Networks, and Biomechanics as Plug-In Component Models of a Cancer Digital Twin. Journal of personalized medicine 14 (5) (2024)
Eleni Kolokotroni, Daniel Abler, Alokendra Ghosh, Eleftheria Tzamali, James Grogan, Eleni Georgiadi, Philippe Büchler, Ravi Radhakrishnan, Helen Byrne, Vangelis Sakkalis, Katerina Nikiforaki, Ioannis Karatzanis, Nigel J B McFarlane, Djibril Kaba, Feng Dong, Rainer M Bohle, Eckart Meese, Norbert Graf, Georgios S Stamatakos, null null
A Multidisciplinary Hyper-Modeling Scheme in Personalized In Silico Oncology: Coupling Cell Kinetics with Metabolism, Signaling Networks, and Biomechanics as Plug-In Component Models of a Cancer Digital Twin. Journal of personalized medicine 14 (5) (2024)
Stephen A Crane, Felipe Jiménez-Ángeles, Yiming Wang, Luis E Ortuno Macias, Jason G Marmorstein, Jiayi Deng, Mehdi Molaei, E James Petersson, Ravi Radhakrishnan, de la Fuente-Nunez Cesar, Monica Olvera de la Cruz, Raymond S Tu, Charles Maldarelli, Ivan J Dmochowski, Kathleen J Stebe
Interfacial rheology of lanthanide binding peptide surfactants at the air-water interface. Soft matter (2024)
Eleni Kolokotroni, Daniel Abler, Alokendra Ghosh, Eleftheria Tzamali, James Grogan, Eleni Georgiadi, Philippe Büchler, Ravi Radhakrishnan, Helen Byrne, Vangelis Sakkalis, Katerina Nikiforaki, Ioannis Karatzanis, Nigel J B McFarlane, Djibril Kaba, Feng Dong, Rainer M Bohle, Eckart Meese, Norbert Graf, Georgios S Stamatakos, null null
A Multidisciplinary Hyper-Modeling Scheme in Personalized In Silico Oncology: Coupling Cell Kinetics with Metabolism, Signaling Networks, and Biomechanics as Plug-In Component Models of a Cancer Digital Twin. Journal of personalized medicine 14 (5) (2024)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Yiming Wang, Kathleen J Stebe, Cesar de la Fuente-Nunez, Ravi Radhakrishnan
Computational Design of Peptides for Biomaterials Applications. ACS applied bio materials (2023)
Moses N Arthur, Kristeen Bebla, Emmanuel Broni, Carolyn Ashley, Miriam Velazquez, Xianin Hua, Ravi Radhakrishnan, Samuel Kojo Kwofie, Whelton A Miller
Design of Inhibitors That Target the Menin-Mixed-Lineage Leukemia Interaction. Computation (Basel, Switzerland) 12 (1) (2023)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Moses N Arthur, Kristeen Bebla, Emmanuel Broni, Carolyn Ashley, Miriam Velazquez, Xianin Hua, Ravi Radhakrishnan, Samuel Kojo Kwofie, Whelton A Miller
Design of Inhibitors That Target the Menin-Mixed-Lineage Leukemia Interaction. Computation (Basel, Switzerland) 12 (1) (2023)
Esther R Berko, Gabriela M Witek, Smita Matkar, Zaritza O Petrova, Megan A Wu, Courtney M Smith, Alex Daniels, Joshua Kalna, Annie Kennedy, Ivan Gostuski, Colleen E Casey, Kateryna Krytska, Mark Gerelus, Dean Pavlick, Susan Ghazarian, Julie R Park, Araz Marachelian, John M Maris, Kelly C Goldsmith, Ravi Radhakrishnan, Mark A Lemmon, Yael P Mosse
Circulating tumor DNA reveals mechanisms of lorlatinib resistance in patients with relapsed/refractory ALK-driven neuroblastoma. Nature communications 14 (1) (2023)
Yiming Wang, Kathleen J Stebe, Cesar de la Fuente-Nunez, Ravi Radhakrishnan
Computational Design of Peptides for Biomaterials Applications. ACS applied bio materials (2023)
Moses N Arthur, Kristeen Bebla, Emmanuel Broni, Carolyn Ashley, Miriam Velazquez, Xianin Hua, Ravi Radhakrishnan, Samuel Kojo Kwofie, Whelton A Miller
Design of Inhibitors That Target the Menin-Mixed-Lineage Leukemia Interaction. Computation (Basel, Switzerland) 12 (1) (2023)
Mehdi Molaei, Sreeja Kutti Kandy, Zachary T Graber, Tobias Baumgart, Ravi Radhakrishnan, John C Crocker
Probing lipid membrane bending mechanics using gold nanorod tracking. Physical review research 4 (1) (2022)
Richard W Tourdot, N Ramakrishnan, Kshitiz Parihar, Ravi Radhakrishnan
Quantification of Curvature Sensing Behavior of Curvature-Inducing Proteins on Model Wavy Substrates. The Journal of membrane biology 255 (2-3) (2022)
FuiBoon Kai, Guanqing Ou, Richard W Tourdot, Connor Stashko, Guido Gaietta, Mark F Swift, Niels Volkmann, Alexandra F Long, Yulong Han, Hector H Huang, Jason J Northey, Andrew M Leidal, Virgile Viasnoff, David M Bryant Editor, Wei Guo, Arun P Wiita, Ming Guo, Sophie Dumont, Dorit Hanein, Ravi Radhakrishnan, Valerie M Weaver
ECM dimensionality tunes actin tension to modulate endoplasmic reticulum function and spheroid phenotypes of mammary epithelial cells. The EMBO journal 41 (17) (2022)
Keshav Patil, Earl Joseph Jordan, Jin H Park, Krishna Suresh, Courtney M Smith, Abigail A Lemmon, Yaël P Mossé, Mark A Lemmon, Ravi Radhakrishnan
Computational studies of anaplastic lymphoma kinase mutations reveal common mechanisms of oncogenic activation. Proceedings of the National Academy of Sciences of the United States of America 118 (10) (2021)
Ravi Radhakrishnan
A survey of multiscale modeling: Foundations, historical milestones, current status, and future prospects. AIChE journal. American Institute of Chemical Engineers 67 (3) (2020)
Ryan P Bradley, David R Slochower, Paul A Janmey, Ravi Radhakrishnan
Divalent cations bind to phosphoinositides to induce ion and isomer specific propensities for nano-cluster initiation in bilayer membranes. Royal Society open science 7 (5) (2020)
Alokendra Ghosh, Ravi Radhakrishnan
Time-dependent antagonist-agonist switching in receptor tyrosine kinase-mediated signaling. BMC bioinformatics 20 (1) (2019)
E Joseph Jordan, Keshav Patil, Krishna Suresh, Jin H Park, Yael P Mosse, Mark A Lemmon, Ravi Radhakrishnan
Computational algorithms for in silico profiling of activating mutations in cancer. Cellular and molecular life sciences : CMLS 76 (14) (2019)
Robert Bucki, Yu-Hsiu Wang, Changsong Yang, Sreeja Kutti Kandy, Ololade Fatunmbi, Ryan Bradley, Katarzyna Pogoda, Tatyana Svitkina, Ravi Radhakrishnan, Paul A Janmey
Lateral distribution of phosphatidylinositol 4,5-bisphosphate in membranes regulates formin- and ARP2/3-mediated actin nucleation. The Journal of biological chemistry 294 (12) (2019)
Samaneh Farokhirad, Ryan P Bradley, Ravi Radhakrishnan
Thermodynamic analysis of multivalent binding of functionalized nanoparticles to membrane surface reveals the importance of membrane entropy and nanoparticle entropy in adhesion of flexible nanoparticles. Soft matter 15 (45) (2019)
Hsiu-Yu Yu, Zahera Jabeen, David M Eckmann, Portonovo S Ayyaswamy, Ravi Radhakrishnan
Microstructure of Flow-Driven Suspension of Hardspheres in Cylindrical Confinement: A Dynamical Density Functional Theory and Monte Carlo Study. Langmuir : the ACS journal of surfaces and colloids 33 (42) (2017)