Rikuri Morita

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 19

Top Topics

Molecular Dynamics Simulations

Carbon Nanotubes

Quality Control

Top Venues

Journal of chemical information and modeling

Nature communications

The journal of physical chemistry. B

Physical chemistry chemical physics : PCCP

This page only lists publications with an associated author ORCID identifier.

Publications

Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Ribosome Tunnel Environment Drives the Formation of α-Helix during Cotranslational Folding. Journal of chemical information and modeling 64 (16) (2024)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Ribosome Tunnel Environment Drives the Formation of α-Helix during Cotranslational Folding. Journal of chemical information and modeling (2024)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Ribosome Tunnel Environment Drives the Formation of α-Helix during Cotranslational Folding. Journal of chemical information and modeling 64 (16) (2024)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Ribosome Tunnel Environment Drives the Formation of α-Helix during Cotranslational Folding. Journal of chemical information and modeling 64 (16) (2024)
Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Latrunculin resistance mechanism of non-conventional actin NAP1 uncovered by molecular dynamics simulations. Cytoskeleton (Hoboken, N.J.) (2023)
Ryuhei Harada, Rikuri Morita, Yasuteru Shigeta
Free-Energy Profiles for Membrane Permeation of Compounds Calculated Using Rare-Event Sampling Methods. Journal of chemical information and modeling 63 (1) (2022)
Yuya Nishida, Sachiko Yanagisawa, Rikuri Morita, Hideki Shigematsu, Kyoko Shinzawa-Itoh, Hitomi Yuki, Satoshi Ogasawara, Ken Shimuta, Takashi Iwamoto, Chisa Nakabayashi, Waka Matsumura, Hisakazu Kato, Chai Gopalasingam, Takemasa Nagao, Tasneem Qaqorh, Yusuke Takahashi, Satoru Yamazaki, Katsumasa Kamiya, Ryuhei Harada, Nobuhiro Mizuno, Hideyuki Takahashi, Yukihiro Akeda, Makoto Ohnishi, Yoshikazu Ishii, Takashi Kumasaka, Takeshi Murata, Kazumasa Muramoto, Takehiko Tosha, Yoshitsugu Shiro, Teruki Honma, Yasuteru Shigeta, Minoru Kubo, Seiji Takashima, Yasunori Shintani
Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases. Nature communications 13 (1) (2022)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Protein Structure Validation Derives a Smart Conformational Search in a Physically Relevant Configurational Subspace. Journal of chemical information and modeling (2022)
Yuya Nishida, Sachiko Yanagisawa, Rikuri Morita, Hideki Shigematsu, Kyoko Shinzawa-Itoh, Hitomi Yuki, Satoshi Ogasawara, Ken Shimuta, Takashi Iwamoto, Chisa Nakabayashi, Waka Matsumura, Hisakazu Kato, Chai Gopalasingam, Takemasa Nagao, Tasneem Qaqorh, Yusuke Takahashi, Satoru Yamazaki, Katsumasa Kamiya, Ryuhei Harada, Nobuhiro Mizuno, Hideyuki Takahashi, Yukihiro Akeda, Makoto Ohnishi, Yoshikazu Ishii, Takashi Kumasaka, Takeshi Murata, Kazumasa Muramoto, Takehiko Tosha, Yoshitsugu Shiro, Teruki Honma, Yasuteru Shigeta, Minoru Kubo, Seiji Takashima, Yasunori Shintani
Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases. Nature communications 13 (1) (2022)
Yuya Nishida, Sachiko Yanagisawa, Rikuri Morita, Hideki Shigematsu, Kyoko Shinzawa-Itoh, Hitomi Yuki, Satoshi Ogasawara, Ken Shimuta, Takashi Iwamoto, Chisa Nakabayashi, Waka Matsumura, Hisakazu Kato, Chai Gopalasingam, Takemasa Nagao, Tasneem Qaqorh, Yusuke Takahashi, Satoru Yamazaki, Katsumasa Kamiya, Ryuhei Harada, Nobuhiro Mizuno, Hideyuki Takahashi, Yukihiro Akeda, Makoto Ohnishi, Yoshikazu Ishii, Takashi Kumasaka, Takeshi Murata, Kazumasa Muramoto, Takehiko Tosha, Yoshitsugu Shiro, Teruki Honma, Yasuteru Shigeta, Minoru Kubo, Seiji Takashima, Yasunori Shintani
Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases. Nature communications 13 (1) (2022)
Ryuhei Harada, Rikuri Morita, Yasuteru Shigeta
Free-Energy Profiles for Membrane Permeation of Compounds Calculated Using Rare-Event Sampling Methods. Journal of chemical information and modeling 63 (1) (2022)
Ryuhei Harada, Rikuri Morita, Yasuteru Shigeta
Free-Energy Profiles for Membrane Permeation of Compounds Calculated Using Rare-Event Sampling Methods. Journal of chemical information and modeling (2022)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Structural Validation by the G -Factor Properly Regulates Boost Potentials Imposed in Conformational Sampling of Proteins. Journal of chemical information and modeling 62 (14) (2022)
Ryuhei Harada, Rikuri Morita, Yasuteru Shigeta
Free-Energy Profiles for Membrane Permeation of Compounds Calculated Using Rare-Event Sampling Methods. Journal of chemical information and modeling 63 (1) (2022)
Yuya Nishida, Sachiko Yanagisawa, Rikuri Morita, Hideki Shigematsu, Kyoko Shinzawa-Itoh, Hitomi Yuki, Satoshi Ogasawara, Ken Shimuta, Takashi Iwamoto, Chisa Nakabayashi, Waka Matsumura, Hisakazu Kato, Chai Gopalasingam, Takemasa Nagao, Tasneem Qaqorh, Yusuke Takahashi, Satoru Yamazaki, Katsumasa Kamiya, Ryuhei Harada, Nobuhiro Mizuno, Hideyuki Takahashi, Yukihiro Akeda, Makoto Ohnishi, Yoshikazu Ishii, Takashi Kumasaka, Takeshi Murata, Kazumasa Muramoto, Takehiko Tosha, Yoshitsugu Shiro, Teruki Honma, Yasuteru Shigeta, Minoru Kubo, Seiji Takashima, Yasunori Shintani
Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases. Nature communications 13 (1) (2022)
Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Structural Variations of Metallothionein with or without Zinc Ions Elucidated by All-Atom Molecular Dynamics Simulations. The journal of physical chemistry. B 125 (46) (2021)
Hayato Aida, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
In silico mutational analyses reveal different ligand-binding abilities of double pockets of medaka fish taste receptor type 1 essential for efficient taste recognition. Physical chemistry chemical physics : PCCP 23 (36) (2021)
Takunori Yasuda, Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Independent Nontargeted Parallel Cascade Selection Molecular Dynamics (Ino-PaCS-MD) to Enhance the Conformational Sampling of Proteins. Journal of chemical theory and computation 17 (9) (2021)
Rikuri Morita, Kentaro Nakano, Yasuteru Shigeta, Ryuhei Harada
Molecular Mechanism for the Actin-Binding Domain of α-Actinin Ain1 Elucidated by Molecular Dynamics Simulations and Mutagenesis Experiments. The journal of physical chemistry. B 124 (39) (2020)