Sayed-Amir Marashi

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 17

Top Venues

PloS one

Scientific reports

Biotechnology letters

TheScientificWorldJournal

University of Tehran, College of Science

University of Tehran, College of Science (MSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Tehran, College of Science

Iran

Associate Professor :: Department of Biotechnology

University of Tehran, College of Science

Iran

Assistant Professor :: Department of Biotechnology

Education History

University of Tehran, College of Science

Iran

MSC :: Department of Biotechnology

Publications

Sobhan Ataei, Jafar Ahmadi, Sayed-Amir Marashi, Ilia Abolhasani
AmiR-P3: An AI-based microRNA prediction pipeline in plants. PloS one 19 (8) (2024)
Sobhan Ataei, Jafar Ahmadi, Sayed-Amir Marashi, Ilia Abolhasani
AmiR-P3: An AI-based microRNA prediction pipeline in plants. PloS one 19 (8) (2024)
Aidin Behravan, Atieh Hashemi, Sayed-Amir Marashi, Hamideh Fouladiha
Genome-scale metabolic model-based engineering of Escherichia coli enhances recombinant single-chain antibody fragment production. Biotechnology letters 44 (10) (2022)
Javad Zamani Amirzakaria, Sayed-Amir Marashi, Mohammad Ali Malboobi, Tahmineh Lohrasebi, Esmail Forouzan
Critical assessment of genome-scale metabolic models of Arabidopsis thaliana . Molecular omics 18 (4) (2022)
Elmira Nazarshodeh, Sayed-Amir Marashi, Sajjad Gharaghani
Structural systems pharmacology: A framework for integrating metabolic network and structure-based virtual screening for drug discovery against bacteria. PloS one 16 (12) (2021)
Javad Zamani Amirzakaria, Mohammad Ali Malboobi, Sayed-Amir Marashi, Tahmineh Lohrasebi
In silico prediction of enzymatic reactions catalyzed by acid phosphatases. Journal of biomolecular structure & dynamics 39 (11) (2020)
Saeedeh Hosseinian, Ehsan Arefian, Hassan Rakhsh-Khorshid, Mehdi Eivani, Ameneh Rezayof, Hamid Pezeshk, Sayed-Amir Marashi
A meta-analysis of gene expression data highlights synaptic dysfunction in the hippocampus of brains with Alzheimer's disease. Scientific reports 10 (1) (2020)
Hamideh Fouladiha, Sayed-Amir Marashi, Shangzhong Li, Zerong Li, Helen O Masson, Behrouz Vaziri, Nathan E Lewis
Systematically gap-filling the genome-scale metabolic model of CHO cells. Biotechnology letters 43 (1) (2020)
Nasibeh Khayer, Mehdi Mirzaie, Sayed-Amir Marashi, Maryam Jalessi
Rps27a might act as a controller of microglia activation in triggering neurodegenerative diseases. PloS one 15 (9) (2020)
Hoda Nouri, Hamideh Fouladiha, Babak Latif, Sayed-Amir Marashi
A reconciliation of genome-scale metabolic network model of Zymomonas mobilis ZM4. Scientific reports 10 (1) (2020)
Maryam Bagheri, Sayed-Amir Marashi, Mohammad Ali Amoozegar
A genome-scale metabolic network reconstruction of extremely halophilic bacterium Salinibacter ruber. PloS one 14 (5) (2019)
Meisam Yousefi, Sayed-Amir Marashi, Ali Sharifi-Zarchi, Sara Taleahmad
The metabolic network model of primed/naive human embryonic stem cells underlines the importance of oxidation-reduction potential and tryptophan metabolism in primed pluripotency. Cell & bioscience 9 (2019)
Mohammad Omid Oftadeh, Sayed-Amir Marashi
Accounting for robustness in modeling signal transduction responses. Journal of receptor and signal transduction research 38 (5-6) (2019)
Javad Aminian-Dehkordi, Seyyed Mohammad Mousavi, Arezou Jafari, Ivan Mijakovic, Sayed-Amir Marashi
Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319. Scientific reports 9 (1) (2019)
Nasibeh Khayer, Mehdi Mirzaie, Sayed-Amir Marashi, Mostafa Rezaei-Tavirani, Fatemeh Goshadrou
Three-way interaction model with switching mechanism as an effective strategy for tracing functionally-related genes. Expert review of proteomics 16 (2) (2018)
Nasibeh Khayer, Sayed-Amir Marashi, Mehdi Mirzaie, Fatemeh Goshadrou
Three-way interaction model to trace the mechanisms involved in Alzheimer's disease transgenic mice. PloS one 12 (9) (2017)
Salma Sohrabi-Jahromi, Sayed-Amir Marashi, Shiva Kalantari
A kidney-specific genome-scale metabolic network model for analyzing focal segmental glomerulosclerosis. Mammalian genome : official journal of the International Mammalian Genome Society 27 (3-4) (2016)
Parizad Babaei, Tahereh Ghasemi-Kahrizsangi, Sayed-Amir Marashi
Modeling the differences in biochemical capabilities of pseudomonas species by flux balance analysis: how good are genome-scale metabolic networks at predicting the differences? TheScientificWorldJournal 2014 (2014)

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Publication Activity (10 Years)

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Sayed-Amir Marashi