Shi Huang

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 7

Top Topics

Bacillus Subtilis

Machine Learning

Antibiotic Resistance Genes

Electronic Health Record

Top Venues

Genome research

Journal of oral microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Chenchen Ma, Yufeng Zhang, Shuaiming Jiang, Fei Teng, Shi Huang, Jiachao Zhang
Cross-cohort single-nucleotide-variant profiling of gut microbiota suggests a novel gut-health assessment approach. mSystems (2023)
Qiyun Zhu, Shi Huang, Antonio Gonzalez, Imran McGrath, Daniel McDonald, Niina Haiminen, George Armstrong, Yoshiki Vázquez-Baeza, Julian Yu, Justin Kuczynski, Gregory D Sepich-Poore, Austin D Swafford, Promi Das, Justin P Shaffer, Franck Lejzerowicz, Pedro Belda Ferre, Aki Samuli Havulinna, Guillaume Méric, Teemu J Niiranen, Leo Lahti, Veikko V Salomaa, Ho-Cheol Kim, Mohit Jain, Michael Inouye, Jack A Gilbert, Rob Knight
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy. mSystems 7 (2) (2022)
Wenjun Liu, Zheng Sun, Chen Ma, Jiachao Zhang, ChenChen Ma, Yinqi Zhao, Hong Wei, Shi Huang, Heping Zhang
Exposure to soil environments during earlier life stages is distinguishable in the gut microbiome of adult mice. Gut microbes 13 (1) (2022)
Chenchen Ma, Chengcheng Zhang, Denghui Chen, Shuaiming Jiang, Siyuan Shen, Dongxue Huo, Shi Huang, Qixiao Zhai, Jiachao Zhang
Probiotic consumption influences universal adaptive mutations in indigenous human and mouse gut microbiota. Communications biology 4 (1) (2021)
Ying Zhang, Shi Huang, Songbo Jia, Zheng Sun, Shanshan Li, Fan Li, Lijuan Zhang, Jie Lu, Kaixuan Tan, Fei Teng, Fang Yang
The predictive power of saliva electrolytes exceeds that of saliva microbiomes in diagnosing early childhood caries. Journal of oral microbiology 13 (1) (2021)
Lingjing Jiang, Niina Haiminen, Anna Paola Carrieri, Shi Huang, Yoshiki Vázquez-Baeza, Laxmi Parida, Ho-Cheol Kim, Austin D Swafford, Rob Knight, Loki Natarajan
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data. Biometrics (2021)
George Armstrong, Kalen Cantrell, Shi Huang, Daniel McDonald, Niina Haiminen, Anna Paola Carrieri, Qiyun Zhu, Antonio Gonzalez, Imran McGrath, Kristen L Beck, Daniel Hakim, Aki Samuli Havulinna, Guillaume Méric, Teemu J Niiranen, Leo Lahti, Veikko V Salomaa, Mohit Jain, Michael Inouye, Austin D Swafford, Ho-Cheol Kim, Laxmi Parida, Yoshiki Vázquez-Baeza, Rob Knight
Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes. Genome research 31 (11) (2021)