Stavros Makrodimitris

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 11

Top Topics

Saccharomyces Cerevisiae

Resistance Training

Top Venues

Evolutionary bioinformatics online

NAR genomics and bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Tugce Senturk Kirmizitas, Caroline van den Berg, Ruben G Boers, Jean Helmijr, Stavros Makrodimitris, Hamit Harun Dag, Marijn Kerkhofs, Corine Beaufort, Jaco Kraan, Wilfred F J Van IJcken, Joost Gribnau, Pakriti Garkhail, Gatske Nieuwenhuyzen-de Boer, Eva-Maria Roes, Heleen van Beekhuizen, Tuba Gunel, Saskia M Wilting, John W M Martens, Maurice Jansen, Ingrid A Boere
Epigenetic and Genomic Hallmarks of PARP-Inhibitor Resistance in Ovarian Cancer Patients. Genes 15 (6) (2024)
Tugce Senturk Kirmizitas, Caroline van den Berg, Ruben G Boers, Jean Helmijr, Stavros Makrodimitris, Hamit Harun Dag, Marijn Kerkhofs, Corine Beaufort, Jaco Kraan, Wilfred F J Van IJcken, Joost Gribnau, Pakriti Garkhail, Gatske Nieuwenhuyzen-de Boer, Eva-Maria Roes, Heleen van Beekhuizen, Tuba Gunel, Saskia M Wilting, John W M Martens, Maurice Jansen, Ingrid A Boere
Epigenetic and Genomic Hallmarks of PARP-Inhibitor Resistance in Ovarian Cancer Patients. Genes 15 (6) (2024)
Tugce Senturk Kirmizitas, Caroline van den Berg, Ruben G Boers, Jean Helmijr, Stavros Makrodimitris, Hamit Harun Dag, Marijn Kerkhofs, Corine Beaufort, Jaco Kraan, Wilfred F J Van IJcken, Joost Gribnau, Pakriti Garkhail, Gatske Nieuwenhuyzen-de Boer, Eva-Maria Roes, Heleen van Beekhuizen, Tuba Gunel, Saskia M Wilting, John W M Martens, Maurice Jansen, Ingrid A Boere
Epigenetic and Genomic Hallmarks of PARP-Inhibitor Resistance in Ovarian Cancer Patients. Genes 15 (6) (2024)
Pia Keukeleire, Stavros Makrodimitris, Marcel J T Reinders
Cell type deconvolution of methylated cell-free DNA at the resolution of individual reads. NAR genomics and bioinformatics 5 (2) (2023)
Stavros Makrodimitris, Bram Pronk, Tamim Abdelaal, Marcel J T Reinders
An in-depth comparison of linear and non-linear joint embedding methods for bulk and single-cell multi-omics. Briefings in bioinformatics 25 (1) (2023)
Mostafa Eltager, Tamim Abdelaal, Mohammed Charrout, Ahmed Mahfouz, Marcel J T Reinders, Stavros Makrodimitris
Benchmarking variational AutoEncoders on cancer transcriptomics data. PloS one 18 (10) (2023)
Amelia Villegas-Morcillo, Stavros Makrodimitris, Roeland C H J van Ham, Angel M Gomez, Victoria Sanchez, Marcel J T Reinders
Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular function. Bioinformatics (Oxford, England) 37 (2) (2021)
Irene van den Bent, Stavros Makrodimitris, Marcel Reinders
The Power of Universal Contextualized Protein Embeddings in Cross-species Protein Function Prediction. Evolutionary bioinformatics online 17 (2021)
Stavros Makrodimitris, Roeland C H J van Ham, Marcel J T Reinders
Automatic Gene Function Prediction in the 2020's. Genes 11 (11) (2020)
Erik Ben van den Akker, Stavros Makrodimitris, Marc Hulsman, Martijn H Brugman, Tatjana Nikolic, Ted Bradley, Quinten Waisfisz, Frank Baas, Marja E Jakobs, Daphne de Jong, P Eline Slagboom, Frank J T Staal, Marcel J T Reinders, Henne Holstege
Dynamic clonal hematopoiesis and functional T-cell immunity in a supercentenarian. Leukemia 35 (7) (2020)
Stavros Makrodimitris, Marcel Reinders, Roeland van Ham
A thorough analysis of the contribution of experimental, derived and sequence-based predicted protein-protein interactions for functional annotation of proteins. PloS one 15 (11) (2020)