Tommy Tsan-Yuk Lam (Tommy T Lam, Tommy T Y Lam)

HKU ResearcherPage ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 16

Top Venues

Nature microbiology

Nature communications

PLoS computational biology

Genome medicine

University of Hong Kong

University of Hong Kong (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Hong Kong

Hong Kong

Assistant professor :: School of Public Health

University of Hong Kong

Hong Kong

Research assistant professor :: School of Public Health

University of Oxford

United Kingdom

Newton Research Fellow :: Department of Zoology

Pennsylvania State University

United States

Postdoctoral researcher :: Center for Infectious Disease Dynamics

Education History

University of Hong Kong

Hong Kong

PHD :: School of Biological Sciences

University of Hong Kong

Hong Kong

BSC

Publications

Yongtao Ye, Marcus H Shum, Joseph L Tsui, Guangchuang Yu, David K Smith, Huachen Zhu, Joseph T Wu, Yi Guan, Tommy Tsan-Yuk Lam
Robust expansion of phylogeny for fast-growing genome sequence data. PLoS computational biology 20 (2) (2024)
Yongtao Ye, Marcus H Shum, Isaac Wu, Carlos Chau, Ningqi Zhao, David K Smith, Joseph T Wu, Tommy Tsan-Yuk Lam
F1ALA: ultrafast and memory-efficient ancestral lineage annotation applied to the huge SARS-CoV-2 phylogeny. Virus evolution 10 (1) (2024)
Yongtao Ye, Marcus H Shum, Joseph L Tsui, Guangchuang Yu, David K Smith, Huachen Zhu, Joseph T Wu, Yi Guan, Tommy Tsan-Yuk Lam
Robust expansion of phylogeny for fast-growing genome sequence data. PLoS computational biology 20 (2) (2024)
Yongtao Ye, Marcus H Shum, Joseph L Tsui, Guangchuang Yu, David K Smith, Huachen Zhu, Joseph T Wu, Yi Guan, Tommy Tsan-Yuk Lam
Robust expansion of phylogeny for fast-growing genome sequence data. PLoS computational biology 20 (2) (2024)
Leo L M Poon, Ahmed Abdul Quadeer, Pavithra Krishnan, Daisy Y M Ng, Lydia D J Chang, Gigi Y Z Liu, Samuel M S Cheng, Tommy Tsan-Yuk Lam, Joseph S Malik Peiris, Matthew R McKay, Leo L M Poon
Within-host genetic diversity of SARS-CoV-2 lineages in unvaccinated and vaccinated individuals. Nature communications 14 (1) (2023)
Leo L M Poon, Ahmed Abdul Quadeer, Pavithra Krishnan, Daisy Y M Ng, Lydia D J Chang, Gigi Y Z Liu, Samuel M S Cheng, Tommy Tsan-Yuk Lam, Joseph S Malik Peiris, Matthew R McKay, Leo L M Poon
Within-host genetic diversity of SARS-CoV-2 lineages in unvaccinated and vaccinated individuals. Nature communications 14 (1) (2023)
Xue-Bing Ni, Xiao-Ming Cui, Jin-Yue Liu, Run-Ze Ye, Yu-Qian Wu, Jia-Fu Jiang, Yi Sun, Qian Wang, Marcus Ho-Hin Shum, Qiao-Cheng Chang, Lin Zhao, Xiao-Hu Han, Ke Ma, Shi-Jing Shen, Ming-Zhu Zhang, Wen-Bin Guo, Jin-Guo Zhu, Lin Zhan, Liang-Jing Li, Shu-Jun Ding, Dai-Yun Zhu, Jie Zhang, Luo-Yuan Xia, Xiang-Yong Oong, Xiang-Dong Ruan, Hong-Ze Shao, Teng-Cheng Que, Guang-Yuan Liu, Chun-Hong Du, En-Jiong Huang, Xin Wang, Li-Feng Du, Chong-Cai Wang, Wen-Qiang Shi, Yu-Sheng Pan, Yu-Hao Zhou, Jiang-Li Qu, Jiang Ma, Cai-Wei Gong, Qi-Qing Chen, Qian Qin, null null, Tommy Tsan-Yuk Lam, Na Jia, Wu-Chun Cao
Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes. Nature microbiology 8 (1) (2023)
Xue-Bing Ni, Xiao-Ming Cui, Jin-Yue Liu, Run-Ze Ye, Yu-Qian Wu, Jia-Fu Jiang, Yi Sun, Qian Wang, Marcus Ho-Hin Shum, Qiao-Cheng Chang, Lin Zhao, Xiao-Hu Han, Ke Ma, Shi-Jing Shen, Ming-Zhu Zhang, Wen-Bin Guo, Jin-Guo Zhu, Lin Zhan, Liang-Jing Li, Shu-Jun Ding, Dai-Yun Zhu, Jie Zhang, Luo-Yuan Xia, Xiang-Yong Oong, Xiang-Dong Ruan, Hong-Ze Shao, Teng-Cheng Que, Guang-Yuan Liu, Chun-Hong Du, En-Jiong Huang, Xin Wang, Li-Feng Du, Chong-Cai Wang, Wen-Qiang Shi, Yu-Sheng Pan, Yu-Hao Zhou, Jiang-Li Qu, Jiang Ma, Cai-Wei Gong, Qi-Qing Chen, Qian Qin, null null, Tommy Tsan-Yuk Lam, Na Jia, Wu-Chun Cao
Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes. Nature microbiology 8 (1) (2023)
Xue-Bing Ni, Xiao-Ming Cui, Jin-Yue Liu, Run-Ze Ye, Yu-Qian Wu, Jia-Fu Jiang, Yi Sun, Qian Wang, Marcus Ho-Hin Shum, Qiao-Cheng Chang, Lin Zhao, Xiao-Hu Han, Ke Ma, Shi-Jing Shen, Ming-Zhu Zhang, Wen-Bin Guo, Jin-Guo Zhu, Lin Zhan, Liang-Jing Li, Shu-Jun Ding, Dai-Yun Zhu, Jie Zhang, Luo-Yuan Xia, Xiang-Yong Oong, Xiang-Dong Ruan, Hong-Ze Shao, Teng-Cheng Que, Guang-Yuan Liu, Chun-Hong Du, En-Jiong Huang, Xin Wang, Li-Feng Du, Chong-Cai Wang, Wen-Qiang Shi, Yu-Sheng Pan, Yu-Hao Zhou, Jiang-Li Qu, Jiang Ma, Cai-Wei Gong, Qi-Qing Chen, Qian Qin, null null, Tommy Tsan-Yuk Lam, Na Jia, Wu-Chun Cao
Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes. Nature microbiology 8 (1) (2023)
Leo L M Poon, Ahmed Abdul Quadeer, Pavithra Krishnan, Daisy Y M Ng, Lydia D J Chang, Gigi Y Z Liu, Samuel M S Cheng, Tommy Tsan-Yuk Lam, Joseph S Malik Peiris, Matthew R McKay, Leo L M Poon
Within-host genetic diversity of SARS-CoV-2 lineages in unvaccinated and vaccinated individuals. Nature communications 14 (1) (2023)
Xue-Bing Ni, Xiao-Ming Cui, Jin-Yue Liu, Run-Ze Ye, Yu-Qian Wu, Jia-Fu Jiang, Yi Sun, Qian Wang, Marcus Ho-Hin Shum, Qiao-Cheng Chang, Lin Zhao, Xiao-Hu Han, Ke Ma, Shi-Jing Shen, Ming-Zhu Zhang, Wen-Bin Guo, Jin-Guo Zhu, Lin Zhan, Liang-Jing Li, Shu-Jun Ding, Dai-Yun Zhu, Jie Zhang, Luo-Yuan Xia, Xiang-Yong Oong, Xiang-Dong Ruan, Hong-Ze Shao, Teng-Cheng Que, Guang-Yuan Liu, Chun-Hong Du, En-Jiong Huang, Xin Wang, Li-Feng Du, Chong-Cai Wang, Wen-Qiang Shi, Yu-Sheng Pan, Yu-Hao Zhou, Jiang-Li Qu, Jiang Ma, Cai-Wei Gong, Qi-Qing Chen, Qian Qin, null null, Tommy Tsan-Yuk Lam, Na Jia, Wu-Chun Cao
Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes. Nature microbiology 8 (1) (2023)
Leo L M Poon, Ruopeng Xie, Dillon C Adam, Joseph L-H Tsui, Daniel K Chu, Lydia D J Chang, Sammi S Y Cheuk, Shreya Gurung, Pavithra Krishnan, Daisy Y M Ng, Gigi Y Z Liu, Carrie K C Wan, Samuel S M Cheng, Kimberly M Edwards, Kathy S M Leung, Joseph T Wu, Dominic N C Tsang, Gabriel Matthew Leung, Benjamin John Cowling, Joseph S Malik Peiris, Tommy Tsan-Yuk Lam, Vijaykrishna Dhanasekaran, Leo L M Poon
Genomic epidemiology of SARS-CoV-2 under an elimination strategy in Hong Kong. Nature communications 13 (1) (2022)
Leo L M Poon, Leo L M Poon, Ahmed Abdul Quadeer, Pavithra Krishnan, Lydia Chang, Gigi Liu, Daisy Ng, Samuel Cheng, Tommy Tsan-Yuk Lam, Joseph S Malik Peiris, Matthew McKay
Within-host diversity of SARS-CoV-2 lineages and effect of vaccination. Research square (2022)
Leo L M Poon, Ruopeng Xie, Dillon Charles Adam, Joseph L-H Tsui, Daniel K Chu, Lydia D J Chang, Sammi S Y Cheuk, Shreya Gurung, Pavithra Krishnan, Daisy Y M Ng, Gigi Y Z Liu, Carrie K C Wan, Kimberly M Edwards, Kathy S M Leung, Gabriel M Leung, Dominic N C Tsang, Gabriel Matthew Leung, Benjamin John Cowling, Joseph S Malik Peiris, Tommy Tsan-Yuk Lam, Vijaykrishna Dhanasekaran, Leo L M Poon
SARS-CoV-2 under an elimination strategy in Hong Kong. medRxiv : the preprint server for health sciences (2021)
Tommy Tsan-Yuk Lam, Oliver G Pybus
Genomic surveillance of avian-origin influenza A viruses causing human disease. Genome medicine 10 (1) (2018)
Yang Liu, Kwok-Fai Lam, Gabriel M Leung, Tommy Tsan-Yuk Lam
Geographically weighted temporally correlated logistic regression model. Scientific reports 8 (1) (2018)

Tommy Tsan-Yuk Lam.css-eqlu8i{font-size:small;padding-left:4px;} (Tommy T Lam, Tommy T Y Lam)

Publication Activity (10 Years)

Top Topics

Top Venues

Tommy Tsan-Yuk Lam (Tommy T Lam, Tommy T Y Lam)