Tomohiro Shimada

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 23

Top Topics

Escherichia Coli

Transcription Factor

Dna Methylation

Genome Wide Identification

Top Venues

International journal of molecular sciences

Scientific reports

FEMS microbiology reviews

This page only lists publications with an associated author ORCID identifier.

Publications

Shunsuke Saito, Ikki Kobayashi, Motoki Hoshina, Emi Uenaka, Atsushi Sakurai, Sousuke Imamura, Tomohiro Shimada
Regulatory Role of GgaR (YegW) for Glycogen Accumulation in Escherichia coli K-12. Microorganisms 12 (1) (2024)
Shunsuke Saito, Ikki Kobayashi, Motoki Hoshina, Emi Uenaka, Atsushi Sakurai, Sousuke Imamura, Tomohiro Shimada
Regulatory Role of GgaR (YegW) for Glycogen Accumulation in Escherichia coli K-12. Microorganisms 12 (1) (2024)
Shunsuke Saito, Ikki Kobayashi, Motoki Hoshina, Emi Uenaka, Atsushi Sakurai, Sousuke Imamura, Tomohiro Shimada
Regulatory Role of GgaR (YegW) for Glycogen Accumulation in Escherichia coli K-12. Microorganisms 12 (1) (2024)
Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada
Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences 24 (4) (2023)
Tomohiro Shimada, Hideji Yoshida
Overview of the Molecular Mechanism of Bacterial Environmental Adaptation by Comprehensive Analysis. International journal of molecular sciences 24 (8) (2023)
Tomohiro Shimada, Hideji Yoshida
Overview of the Molecular Mechanism of Bacterial Environmental Adaptation by Comprehensive Analysis. International journal of molecular sciences 24 (8) (2023)
Hideji Yoshida, Tomohiro Shimada, Akira Ishihama
Metal-Responsive Transcription Factors Co-Regulate Anti-Sigma Factor (Rsd) and Ribosome Dimerization Factor Expression. International journal of molecular sciences 24 (5) (2023)
Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada
Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences 24 (4) (2023)
Tomohiro Shimada, Hideji Yoshida
Overview of the Molecular Mechanism of Bacterial Environmental Adaptation by Comprehensive Analysis. International journal of molecular sciences 24 (8) (2023)
Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada
Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences 24 (4) (2023)
Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada
Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences 24 (4) (2023)
Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada
Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences 24 (4) (2023)
Tomohiro Shimada, Hideji Yoshida
Overview of the Molecular Mechanism of Bacterial Environmental Adaptation by Comprehensive Analysis. International journal of molecular sciences 24 (8) (2023)
Hideji Yoshida, Tomohiro Shimada, Akira Ishihama
Metal-Responsive Transcription Factors Co-Regulate Anti-Sigma Factor (Rsd) and Ribosome Dimerization Factor Expression. International journal of molecular sciences 24 (5) (2023)
Tomohiro Shimada, Hideji Yoshida
Overview of the Molecular Mechanism of Bacterial Environmental Adaptation by Comprehensive Analysis. International journal of molecular sciences 24 (8) (2023)
Hideji Yoshida, Tomohiro Shimada, Akira Ishihama
Metal-Responsive Transcription Factors Co-Regulate Anti-Sigma Factor (Rsd) and Ribosome Dimerization Factor Expression. International journal of molecular sciences 24 (5) (2023)
Akira Ishihama, Tomohiro Shimada
Hierarchy of transcription factor network in Escherichia coli K-12: H-NS-mediated silencing and Anti-silencing by global regulators. FEMS microbiology reviews 45 (6) (2022)
Ikki Kobayashi, Kenji Mochizuki, Jun Teramoto, Sousuke Imamura, Kazuhiro Takaya, Akira Ishihama, Tomohiro Shimada
Transcription Factor SrsR (YgfI) Is a Novel Regulator for the Stress-Response Genes in Stationary Phase in Escherichia coli K-12. International journal of molecular sciences 23 (11) (2022)
Tomohiro Shimada, Kohta Nakazawa, Tomoyuki Tachikawa, Natsumi Saito, Tatsuya Niwa, Hideki Taguchi, Kan Tanaka
Acetate overflow metabolism regulates a major metabolic shift after glucose depletion in Escherichia coli. FEBS letters 595 (15) (2021)
Tomohiro Shimada, Yui Yokoyama, Takumi Anzai, Kaneyoshi Yamamoto, Akira Ishihama
Author Correction: Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12. Scientific reports 10 (1) (2020)
Tomohiro Shimada, Yui Yokoyama, Takumi Anzai, Kaneyoshi Yamamoto, Akira Ishihama
Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12. Scientific reports 9 (1) (2019)
Takayuki Shimizu, Sylwia M Kacprzak, Nobuyoshi Mochizuki, Akira Nagatani, Satoru Watanabe, Tomohiro Shimada, Kan Tanaka, Yuuki Hayashi, Munehito Arai, Dario Leister, Haruko Okamoto, Matthew J Terry, Tatsuru Masuda
The retrograde signaling protein GUN1 regulates tetrapyrrole biosynthesis. Proceedings of the National Academy of Sciences of the United States of America 116 (49) (2019)
Hideji Yoshida, Tomohiro Shimada, Akira Ishihama
Coordinated Hibernation of Transcriptional and Translational Apparatus during Growth Transition of Escherichia coli to Stationary Phase. mSystems 3 (5) (2018)