Xin-Hai Ye (Xinhai Ye, X H Ye)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 30

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Scientific data

Molecular ecology resources

This page only lists publications with an associated author ORCID identifier.

Publications

María Isabel Castaño, Xin-Hai Ye, Floria M K Uy
First genome assembly of the order Strepsiptera using PacBio HiFi reads reveals a miniature genome. Scientific data 11 (1) (2024)
Yi Yang, Shan Xiao, Xianxin Zhao, Yu H Sun, Qi Fang, Longjiang Fan, Gong-Yin Ye, Xin-Hai Ye
Host and venom evolution in parasitoid wasps: does independently adapting to the same host shape the evolution of the venom gland transcriptome? BMC biology 22 (1) (2024)
María Isabel Castaño, Xin-Hai Ye, Floria M K Uy
First genome assembly of the order Strepsiptera using PacBio HiFi reads reveals a miniature genome. Scientific data 11 (1) (2024)
Yi Yang, Shan Xiao, Xianxin Zhao, Yu H Sun, Qi Fang, Longjiang Fan, Gong-Yin Ye, Xin-Hai Ye
Host and venom evolution in parasitoid wasps: does independently adapting to the same host shape the evolution of the venom gland transcriptome? BMC biology 22 (1) (2024)
Bo Zhang, Longfei Chen, Shan Xiao, Cong Dang, Fang Wang, Qi Fang, Xin-Hai Ye, David W Stanley, Gong-Yin Ye
iSalivaomicDB: A comprehensive saliva omics database for insects. Insect science (2024)
Yi Yang, Shan Xiao, Xianxin Zhao, Yu H Sun, Qi Fang, Longjiang Fan, Gong-Yin Ye, Xin-Hai Ye
Host and venom evolution in parasitoid wasps: does independently adapting to the same host shape the evolution of the venom gland transcriptome? BMC biology 22 (1) (2024)
Shan Xiao, Xin-Hai Ye, Shuping Wang, Yi Yang, Qi Fang, Fang Wang, Gong-Yin Ye
Genome assembly of the ectoparasitoid wasp Theocolax elegans. Scientific data 10 (1) (2023)
Kaili Yu, Jin Chen, Xue Bai, Shijiao Xiong, Xin-Hai Ye, Yi Yang, Hongwei Yao, Fang Wang, Qi Fang, Qisheng Song, Gong-Yin Ye
Multi-Omic Identification of Venom Proteins Collected from Artificial Hosts of a Parasitoid Wasp. Toxins 15 (6) (2023)
Chun He, Xin-Hai Ye, Yi Yang, Liya Hu, Yuxuan Si, Xianxin Zhao, Longfei Chen, Qi Fang, Ying Wei, Fei Wu, Gong-Yin Ye
DeepAlgPro: an interpretable deep neural network model for predicting allergenic proteins. Briefings in bioinformatics (2023)
Shan Xiao, Xin-Hai Ye, Shuping Wang, Yi Yang, Qi Fang, Fang Wang, Gong-Yin Ye
Genome assembly of the ectoparasitoid wasp Theocolax elegans. Scientific data 10 (1) (2023)
Shan Xiao, Xin-Hai Ye, Shuping Wang, Yi Yang, Qi Fang, Fang Wang, Gong-Yin Ye
Genome assembly of the ectoparasitoid wasp Theocolax elegans. Scientific data 10 (1) (2023)
Xin-Hai Ye, Chun He, Yi Yang, Yu Huining Sun, Shijiao Xiong, Kevin C Chan, Yuxuan Si, Shan Xiao, Xianxin Zhao, Haiwei Lin, Yang Mei, Yufeng Yao, Gongyin Ye, Fei Wu, Qi Fang
Comprehensive isoform-level analysis reveals the contribution of alternative isoforms to venom evolution and repertoire diversity. Genome research (2023)
Kaili Yu, Jin Chen, Xue Bai, Shijiao Xiong, Xin-Hai Ye, Yi Yang, Hongwei Yao, Fang Wang, Qi Fang, Qisheng Song, Gong-Yin Ye
Multi-Omic Identification of Venom Proteins Collected from Artificial Hosts of a Parasitoid Wasp. Toxins 15 (6) (2023)
Kaili Yu, Jin Chen, Xue Bai, Shijiao Xiong, Xin-Hai Ye, Yi Yang, Hongwei Yao, Fang Wang, Qi Fang, Qisheng Song, Gong-Yin Ye
Multi-Omic Identification of Venom Proteins Collected from Artificial Hosts of a Parasitoid Wasp. Toxins 15 (6) (2023)
Kaili Yu, Jin Chen, Xue Bai, Shijiao Xiong, Xin-Hai Ye, Yi Yang, Hongwei Yao, Fang Wang, Qi Fang, Qisheng Song, Gong-Yin Ye
Multi-Omic Identification of Venom Proteins Collected from Artificial Hosts of a Parasitoid Wasp. Toxins 15 (6) (2023)
Xin-Hai Ye, Shijiao Xiong, Ziwen Teng, Yi Yang, Jiale Wang, Kaili Yu, Huizi Wu, Yang Mei, Cheng Xue, Zhichao Yan, Chuanlin Yin, Fang Wang, Hongwei Yao, Qi Fang, Qisheng Song, Gong-Yin Ye, Fei Li
Genome of the parasitoid wasp Cotesia chilonis sheds light on amino acid resource exploitation. BMC biology 20 (1) (2022)
Xin-Hai Ye, Yi Yang, Can Zhao, Shan Xiao, Yu Huining Sun, Chun He, Shijiao Xiong, Xianxin Zhao, Bo Zhang, Haiwei Lin, Jiamin Shi, Yang Mei, Hongxing Xu, Qi Fang, Fei Wu, Dunsong Li, Gong-Yin Ye
Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps. Nature communications 13 (1) (2022)
Hongxing Xu, Xin-Hai Ye, Yajun Yang, Yi Yang, Yu H Sun, Yang Mei, Shijiao Xiong, Kang He, Le Xu, Qi Fang, Fei Li, Gongyin Ye, Zhongxian Lu
Comparative Genomics Sheds Light on the Convergent Evolution of Miniaturized Wasps. Molecular biology and evolution 38 (12) (2022)
Longfei Chen, Kun Lang, Bo Zhang, Jiamin Shi, Xin-Hai Ye, David W Stanley, Qi Fang, Gong-Yin Ye
iVenomDB: A manually curated database for insect venom proteins. Insect science (2022)
Jinlong Huo, L Q Zhang, X Zhang, X W Wu, Xin-Hai Ye, Yu Huining Sun, W M Cheng, K Yang, W R Pan, Y Z Zeng
Genome-wide single nucleotide polymorphism array and whole-genome sequencing reveal the inbreeding progression of Banna minipig inbred line. Animal genetics (2021)
Zi-Wen Teng, Hui-Zi Wu, Xin-Hai Ye, Qi Fang, Hong-Xu Zhou, Gong-Yin Ye
An endoparasitoid uses its egg surface proteins to regulate its host immune response. Insect science (2021)
Yang Mei, Dong Jing, Shenyang Tang, Xi Chen, Hao Chen, Haonan Duanmu, Yuyang Cong, Mengyao Chen, Xin-Hai Ye, Hang Zhou, Kang He, Fei Li
InsectBase 2.0: a comprehensive gene resource for insects. Nucleic acids research (2021)
Hongxing Xu, Xianxin Zhao, Yajun Yang, Xi Chen, Yang Mei, Kang He, Le Xu, Xin-Hai Ye, Ying Liu, Fei Li, Zhongxian Lu
Chromosome-level genome assembly of an agricultural pest, the rice leaffolder Cnaphalocrocis exigua (Crambidae, Lepidoptera). Molecular ecology resources (2021)
Yi Yang, Xin-Hai Ye, Cong Dang, Yunshen Cao, Rui Hong, Yu H Sun, Shan Xiao, Yang Mei, Le Xu, Qi Fang, Huamei Xiao, Fei Li, Gong-Yin Ye
Genome of the pincer wasp Gonatopus flavifemur reveals unique venom evolution and a dual adaptation to parasitism and predation. BMC biology 19 (1) (2021)
Xianxin Zhao, Hongxing Xu, Kang He, Zhenmin Shi, Xi Chen, Xin-Hai Ye, Yang Mei, Yajun Yang, Meizhen Li, Libin Gao, Le Xu, Huamei Xiao, Ying Liu, Zhongxian Lu, Fei Li
A chromosome-level genome assembly of rice leaffolder, Cnaphalocrocis medinalis. Molecular ecology resources 21 (2) (2020)
Xin-Hai Ye, Shijiao Xiong, Ziwen Teng, Yi Yang, Jiale Wang, Kaili Yu, Huizi Wu, Yang Mei, Zhichao Yan, Sammy Cheng, Chuanlin Yin, Fang Wang, Hongwei Yao, Qi Fang, Qisheng Song, John H Werren, Gong-Yin Ye, Fei Li
Amino acid synthesis loss in parasitoid wasps and other hymenopterans. eLife 9 (2020)
Xin-Hai Ye, Zhichao Yan, Yi Yang, Shan Xiao, Longfei Chen, Jiale Wang, Fei Wang, Shijiao Xiong, Yang Mei, Fang Wang, Hongwei Yao, Qisheng Song, Fei Li, Qi Fang, John H Werren, Gong-Yin Ye
A chromosome-level genome assembly of the parasitoid wasp Pteromalus puparum. Molecular ecology resources 20 (5) (2020)
Huamei Xiao, Xin-Hai Ye, Hongxing Xu, Yang Mei, Yi Yang, Xi Chen, Yajun Yang, Tao Liu, Yongyi Yu, Weifei Yang, Zhongxian Lu, Fei Li
The genetic adaptations of fall armyworm Spodoptera frugiperda facilitated its rapid global dispersal and invasion. Molecular ecology resources 20 (4) (2020)
Xin-Hai Ye, Shijiao Xiong, Ziwen Teng, Yi Yang, Jiale Wang, Kaili Yu, Huizi Wu, Yang Mei, Zhichao Yan, Sammy Cheng, Chuanlin Yin, Fang Wang, Hongwei Yao, Qi Fang, Qisheng Song, John H Werren, Gong-Yin Ye, Fei Li
Retraction: Amino acid synthesis loss in parasitoid wasps and other hymenopterans. eLife 9 (2020)
Xin-Hai Ye, Le Xu, Xiang Li, Kang He, Hongxia Hua, Zhenghong Cao, Jiadan Xu, Wanyi Ye, Jiao Zhang, Zhuting Yuan, Fei Li
miR-34 modulates wing polyphenism in planthopper. PLoS genetics 15 (6) (2019)