Yi Shi

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 44

Top Venues

Nature communications

Science (New York, N.Y.)

Journal of virology

Nature microbiology

Institute of Microbiology Chinese Academy of Sciences

Zhejiang University College of Life Sciences (BSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute of Microbiology Chinese Academy of Sciences

China

Professor, Principal Investigator, Deputy Director :: CAS Key Laboratory of Pathogenic Microbiology and Immunology

Beijing Institutes of Life Science Chinese Academy of Sciences

China

Assistant Professor, Associate Professor

Institute of Microbiology Chinese Academy of Sciences

China

Assistant Professor :: CAS Key Laboratory of Pathogenic Microbiology and Immunology

Education History

Zhejiang University College of Life Sciences

China

BSC

Publications

Lu Kuai, Junqing Sun, Qi Peng, Xuejin Zhao, Bin Yuan, Sheng Liu, Yuhai Bi, Yi Shi
Cryo-EM structure of DNA polymerase of African swine fever virus. Nucleic acids research (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Junqing Sun, Lu Kuai, Lei Zhang, Yufeng Xie, Yanfang Zhang, Yan Li, Qi Peng, Yuekun Shao, Qiuxian Yang, Wen-Xia Tian, Junhao Zhu, Jianxun Qi, Yi Shi, Tao Deng, George Fu Gao
NS2 induces an influenza A RNA polymerase hexamer and acts as a transcription to replication switch. EMBO reports (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Yi Shi
Breaking through the concept barrier to develop broad-spectrum antiviral counter-measures. Nature reviews. Microbiology (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Yi Shi
Breaking through the concept barrier to develop broad-spectrum antiviral counter-measures. Nature reviews. Microbiology 22 (8) (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Changyao Li, Mingzhu Jia, Tianjiao Hao, Qi Peng, Ruchao Peng, Yan Chai, Yi Shi, Hao Song, George Fu Gao
African swine fever virus A137R assembles into a dodecahedron cage. Journal of virology 98 (3) (2024)
Qi Peng, Bin Yuan, Jinlong Cheng, Min Wang, Siwei Gao, Suran Bai, Xuejin Zhao, Jianxun Qi, George Fu Gao, Yi Shi
Molecular mechanism of de novo replication by the Ebola virus polymerase. Nature (2023)
Xiaohui Ju, Ziqiao Wang, Pengcheng Wang, Wenlin Ren, Yanying Yu, Yin Yu, Bin Yuan, Jingwei Song, Xiaochun Zhang, Yu Zhang, Chang Xu, Boxue Tian, Yi Shi, Rong Zhang, Qiang Ding
SARS-CoV-2 main protease cleaves MAGED2 to antagonize host antiviral defense. mBio (2023)
Qi Peng, Yufeng Xie, Lu Kuai, Han Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structure of monkeypox virus DNA polymerase holoenzyme. Science (New York, N.Y.) 379 (6627) (2022)
Qi Peng, Yufeng Xie, Lu Kuai, Han Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structure of monkeypox virus DNA polymerase holoenzyme. Science (New York, N.Y.) 379 (6627) (2022)
Qi Peng, Yufeng Xie, Lu Kuai, Han Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structure of monkeypox virus DNA polymerase holoenzyme. Science (New York, N.Y.) (2022)
Qi Peng, Yufeng Xie, Lu Kuai, Han Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structure of monkeypox virus DNA polymerase holoenzyme. Science (New York, N.Y.) 379 (6627) (2022)
Yulu Chen, Fei Wang, Liwei Yin, Haihai Jiang, Xishan Lu, Yu-Hai Bi, Wei Zhang, Yi Shi, Roberto Burioni, Zhou Tong, Hao Song, Jianxun Qi, George Fu Gao
Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes. Nature communications 13 (1) (2022)
Qi Peng, Yufeng Xie, Lu Kuai, Han Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structure of monkeypox virus DNA polymerase holoenzyme. Science (New York, N.Y.) 379 (6627) (2022)
Bin Yuan, Qi Peng, Jinlong Cheng, Min Wang, Jin Zhong, Jianxun Qi, George Fu Gao, Yi Shi
Structure of the Ebola virus polymerase complex. Nature 610 (7931) (2022)
Yulu Chen, Fei Wang, Liwei Yin, Haihai Jiang, Xishan Lu, Yu-Hai Bi, Wei Zhang, Yi Shi, Roberto Burioni, Zhou Tong, Hao Song, Jianxun Qi, George Fu Gao
Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes. Nature communications 13 (1) (2022)
Yulu Chen, Fei Wang, Liwei Yin, Haihai Jiang, Xishan Lu, Yu-Hai Bi, Wei Zhang, Yi Shi, Roberto Burioni, Zhou Tong, Hao Song, Jianxun Qi, George Fu Gao
Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes. Nature communications 13 (1) (2022)
Yulu Chen, Fei Wang, Liwei Yin, Haihai Jiang, Xishan Lu, Yu-Hai Bi, Wei Zhang, Yi Shi, Roberto Burioni, Zhou Tong, Hao Song, Jianxun Qi, George Fu Gao
Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes. Nature communications 13 (1) (2022)
Yang Yang, Minghui Yang, Yun Peng, Yanhua Liang, Jinli Wei, Li Xing, Liping Guo, Xiaohe Li, Jie Li, Jun Wang, Mianhuan Li, Zhixiang Xu, Mingxia Zhang, Fuxiang Wang, Yi Shi, Jing Yuan, Ying-Xia Liu
Longitudinal analysis of antibody dynamics in COVID-19 convalescents reveals neutralizing responses up to 16 months after infection. Nature microbiology 7 (3) (2022)
Naphak Modhiran, Hao Song, Lidong Liu, Cheryl Bletchly, Lou Brillault, Alberto A Amarilla, Xiaoying Xu, Jianxun Qi, Yan Chai, Stacey T M Cheung, Renee J Traves, Yin Xiang Setoh, Summa Bibby, Connor A P Scott, Morgan E Freney, Natalee D Newton, Alexander A Khromykh, Keith J Chappell, David A Muller, Katryn J Stacey, Michael J Landsberg, Yi Shi, George Fu Gao, Paul R Young, Daniel Watterson
A broadly protective antibody that targets the flavivirus NS1 protein. Science (New York, N.Y.) 371 (6525) (2021)
Jing Wang, Pupu Ge, Zehui Lei, Zhe Lu, Lihua Qiang, Qiyao Chai, Yong Zhang, Dongdong Zhao, Bingxi Li, Jiaqi Su, Ruchao Peng, Yu Pang, Yi Shi, Yu Zhang, George Fu Gao, Xiao-Bo Qiu, Cui Hua Liu
Mycobacterium tuberculosis protein kinase G acts as an unusual ubiquitinating enzyme to impair host immunity. EMBO reports 22 (6) (2021)
Qihui Wang, Hua Chen, Yi Shi, Alice C Hughes, William J Liu, Jingkun Jiang, George Fu Gao, Yongbiao Xue, Yi-Gang Tong
Tracing the origins of SARS-CoV-2: lessons learned from the past. Cell research 31 (11) (2021)
Penghui Yang, Yingze Zhao, Jie Li, Chuanyu Liu, Linnan Zhu, Jie Zhang, Yeya Yu, Wen-Jing Wang, Guanglin Lei, Jin Yan, Fang Sun, Chengrong Bian, Fanping Meng, Zhe Xu, Changqing Bai, Beiwei Ye, Yuanyuan Guo, Liumei Shu, Xiaoju Yuan, Ning Zhang, Yu-Hai Bi, Yi Shi, Guizhen Wu, Shaogeng Zhang, George F Gao, Longqi Liu, William J Liu, Hai-Xi Sun
Downregulated miR-451a as a feature of the plasma cfRNA landscape reveals regulatory networks of IL-6/IL-6R-associated cytokine storms in COVID-19 patients. Cellular & molecular immunology 18 (4) (2021)
Yu Bai, Fei Ye, Yong Feng, Hanyi Liao, Hao Song, Jianxun Qi, George Fu Gao, Wenjie Tan, Lifeng Fu, Yi Shi
Structural basis for the inhibition of the SARS-CoV-2 main protease by the anti-HCV drug narlaprevir. Signal transduction and targeted therapy 6 (1) (2021)
Xin Xu, Ruchao Peng, Qi Peng, Min Wang, Ying Xu, Sheng Liu, Xiaolin Tian, Haiteng Deng, Yimin Tong, Xiaoyou Hu, Jin Zhong, Peiyi Wang, Jianxun Qi, George Fu Gao, Yi Shi
Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals. Nature microbiology 6 (7) (2021)
Hua Hao Fan, Bixia Hong, Yuqian Luo, Qi Peng, Liqin Wang, Xiangshu Jin, Yangzhen Chen, Yunjia Hu, Yi Shi, Tong Li, Hui Zhuang, Yi-Hua Zhou, Yigang Tong, Kuanhui Xiang
The effect of whey protein on viral infection and replication of SARS-CoV-2 and pangolin coronavirus in vitro. Signal transduction and targeted therapy 5 (1) (2020)
Ruchao Peng, Xin Xu, Jiamei Jing, Min Wang, Qi Peng, Sheng Liu, Ying Wu, Xichen Bao, Peiyi Wang, Jianxun Qi, George Fu Gao, Yi Shi
Structural insight into arenavirus replication machinery. Nature 579 (7800) (2020)
Lifeng Fu, Fei Ye, Yong Feng, Feng Yu, Qisheng Wang, Yan Wu, Cheng Zhao, Huan Sun, Baoying Huang, Peihua Niu, Hao Song, Yi Shi, Xuebing Li, Wenjie Tan, Jianxun Qi, George Fu Gao
Both Boceprevir and GC376 efficaciously inhibit SARS-CoV-2 by targeting its main protease. Nature communications 11 (1) (2020)
Haiping Zhang, Yang Yang, Junxin Li, Min Wang, Saravanan Konda Mani, Jinli Wei, Justin Tze-Yang Ng, Md Tofazzal Hossain, Maoxuan Liu, Huiling Zhang, Xiaohu Ren, Pan Yi, Yin Peng, Yi Shi, Xianchun Wan, Ying-Xia Liu, Yanjie Wei
A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro. PLoS computational biology 16 (12) (2020)
Yu-Hai Bi, Xiufan Liu, Shanqin Li, Guanghua Fu, Tao Jin, Cheng Zhang, Yongchun Yang, Zhenghai Ma, Wen-Xia Tian, Jida Li, Shuqi Xiao, Liqiang Li, Renfu Yin, Yi Zhang, Lixin Wang, Yantao Qin, Zhongzi Yao, Fanyu Meng, Dongfang Hu, Delong Li, Gary Wong, Fei Liu, Na Lv, Liang Wang, Lifeng Fu, Yang Yang, Yun Peng, Jinmin Ma, Kirill Sharshov, Alexander Shestopalov, Marina A Gulyaeva, George Fu Gao, Jianjun Chen, Yi Shi, William J Liu, Dong Chu, Yu Huang, Yingxia Liu, Lei Liu, Wenjun Liu, Quanjiao Chen, Wei-Feng Shi
Dominant subtype switch in avian influenza viruses during 2016-2019 in China. Nature communications 11 (1) (2020)
Junqing Sun, Congcong Liu, Ruchao Peng, Fu-Kun Zhang, Zhou Tong, Sheng Liu, Yi Shi, Zhennan Zhao, Wen-Bo Zeng, George Fu Gao, Hong-Jie Shen, Xiao Ming Yang, Min-Hua Luo, Jianxun Qi, Peiyi Wang
Cryo-EM structure of the varicella-zoster virus A-capsid. Nature communications 11 (1) (2020)
Liang Wang, Xavier Didelot, Jing Yang, Gary Wong, Yi Shi, Wenjun Liu, George Fu Gao, Yu-Hai Bi
Inference of person-to-person transmission of COVID-19 reveals hidden super-spreading events during the early outbreak phase. Nature communications 11 (1) (2020)
Qihui Wang, Tong Ma, Yan Wu, Zhihai Chen, Hui Zeng, Zhou Tong, Feng Gao, Jianxun Qi, Zhennan Zhao, Yan Chai, Huabing Yang, Gary Wong, Yu-Hai Bi, Lili Wu, Rui Shi, Mi Yang, Jian Song, Haihai Jiang, Zhiqiang An, Junzhi Wang, Tilahun D Yilma, Yi Shi, William J Liu, Mifang Liang, Chuan Qin, George Fu Gao, Jinghua Yan
Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nature microbiology 4 (7) (2019)
Haixia Xiao, Tianling Guo, Mi Yang, Jianxun Qi, Chaobin Huang, Yuanyuan Hong, Jinjin Gu, Xuefei Pang, William Jun Liu, Ruchao Peng, John McCauley, Yuhai Bi, Shihua Li, Junxia Feng, Hailiang Zhang, Xupei Zhang, Xishan Lu, Jinghua Yan, Liling Chen, Yi Shi, Weizhi Chen, George Fu Gao
Light chain modulates heavy chain conformation to change protection profile of monoclonal antibodies against influenza A viruses. Cell discovery 5 (2019)
Qi Peng, Yuqian Liu, Ruchao Peng, Min Wang, Wei Yang, Hao Song, Yuhai Chen, Sheng Liu, Min Han, Xinzheng Zhang, Peiyi Wang, Jinghua Yan, Buchang Zhang, Jianxun Qi, Tao Deng, George Fu Gao, Yi Shi
Structural insight into RNA synthesis by influenza D polymerase. Nature microbiology 4 (10) (2019)
Qihui Wang, Hao Song, Hao Cheng, Jianxun Qi, Gol Nam, Shuguang Tan, Junzhi Wang, Min Fang, Yi Shi, Zhigang Tian, Xuetao Cao, Zhiqiang An, Jinghua Yan, George Fu Gao
Structures of the four Ig-like domain LILRB2 and the four-domain LILRB1 and HLA-G1 complex. Cellular & molecular immunology 17 (9) (2019)
Kuan-Ying A Huang, Pramila Rijal, Haihai Jiang, Beibei Wang, Lisa Schimanski, Tao Dong, Yo-Min Liu, Pengxiang Chang, Munir Iqbal, Mu-Chun Wang, Zhihai Chen, Rui Song, Chung-Chi Huang, Jeng-How Yang, Jianxun Qi, Tzou-Yien Lin, Ang Li, Timothy J Powell, Jia-Tsrong Jan, Che Ma, George Fu Gao, Yi Shi, Alain R Townsend
Structure-function analysis of neutralizing antibodies to H7N9 influenza from naturally infected humans. Nature microbiology 4 (2) (2018)
Xiangjun Chen, Xiaolin Sun, Wei Yang, Bing Yang, Xiaozhen Zhao, Shuting Chen, Lili He, Hui Chen, Changmei Yang, Le Xiao, Zai Chang, Jianping Guo, Jing He, Fuping Zhang, Fang Zheng, Zhibin Hu, Zhiyong Yang, Jizhong Lou, Wenjie Zheng, Hai Qi, Chenqi Xu, Hong Zhang, Hongying Shan, Xu-Jie Zhou, Qingwen Wang, Yi Shi, Luhua Lai, Zhan-Guo Li, Wanli Liu
An autoimmune disease variant of IgG1 modulates B cell activation and differentiation. Science (New York, N.Y.) 362 (6415) (2018)
Wenqian Duan, Hao Song, Haiyuan Wang, Yan Chai, Chao Su, Jianxun Qi, Yi Shi, George Fu Gao
The crystal structure of Zika virus NS5 reveals conserved drug targets. The EMBO journal 36 (7) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Yi Shi