Yu-Chiao Chiu

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 21

Top Venues

Nature communications

Blood cancer journal

bioRxiv : the preprint server for biology

medRxiv : the preprint server for health sciences

University of Texas Health Science Center at San Antonio

National Taiwan University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Texas Health Science Center at San Antonio

United States

Postdoctoral Fellow :: Greehey Children's Cancer Research Institute

Taichung Veterans General Hospital

Taiwan

Postdoctoral Fellow :: Department of Medical Research

Education History

National Taiwan University

Taiwan

PHD :: Graduate Institute of Biomedical Electronics and Bioinformatics

Publications

Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Debodipta Das, Xiaojing Wang, Yu-Chiao Chiu, Hakim Bouamar, Francis E Sharkey, Jorge E Lopera, Zhao Lai, Susan T Weintraub, Xianlin Han, Yi Zou, Hung-I H Chen, Carla R Zeballos Torrez, Xiang Gu, Matyas Cserhati, Joel E Michalek, Glenn A Halff, Yidong Chen, Siyuan Zheng, Francisco G Cigarroa, Lu-Zhe Sun
Integrative multi-omics characterization of hepatocellular carcinoma in Hispanic patients. medRxiv : the preprint server for health sciences (2024)
Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Xidong Wu, Yiming Zeng, Arun Das, Sumin Jo, Tinghe Zhang, Parth Patel, Jianqiu Zhang, Shou-Jiang Gao, Dexter Pratt, Yu-Chiao Chiu, Yufei Huang
reguloGPT: Harnessing GPT for Knowledge Graph Construction of Molecular Regulatory Pathways. bioRxiv : the preprint server for biology (2024)
Xidong Wu, Yiming Zeng, Arun Das, Sumin Jo, Tinghe Zhang, Parth Patel, Jianqiu Zhang, Shou-Jiang Gao, Dexter Pratt, Yu-Chiao Chiu, Yufei Huang
reguloGPT: Harnessing GPT for Knowledge Graph Construction of Molecular Regulatory Pathways. bioRxiv : the preprint server for biology (2024)
Xidong Wu, Yiming Zeng, Arun Das, Sumin Jo, Tinghe Zhang, Parth Patel, Jianqiu Zhang, Shou-Jiang Gao, Dexter Pratt, Yu-Chiao Chiu, Yufei Huang
reguloGPT: Harnessing GPT for Knowledge Graph Construction of Molecular Regulatory Pathways. bioRxiv : the preprint server for biology (2024)
Debodipta Das, Xiaojing Wang, Yu-Chiao Chiu, Hakim Bouamar, Francis E Sharkey, Jorge E Lopera, Zhao Lai, Susan T Weintraub, Xianlin Han, Yi Zou, Hung-I H Chen, Carla R Zeballos Torrez, Xiang Gu, Matyas Cserhati, Joel E Michalek, Glenn A Halff, Yidong Chen, Siyuan Zheng, Francisco G Cigarroa, Lu-Zhe Sun
Integrative multi-omics characterization of hepatocellular carcinoma in Hispanic patients. medRxiv : the preprint server for health sciences (2024)
Anwaar Saeed, Robin Park, Harsh Pathak, Ayah Nedal Al-Bzour, Junqiang Dai, Milind Phadnis, Raed Al-Rajabi, Anup Kasi, Joaquina Celebre Baranda, Weijing Sun, Stephen K Williamson, Yu-Chiao Chiu, Hatice Ulku Osmanbeyoglu, Rashna Madan, Hassan Mohammed Abushukair, Kelly Mulvaney, Andrew K Godwin, Azhar Saeed
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort. Nature communications 15 (1) (2024)
Tapsya Nayak, Li-Ju Wang, Michael Ning, Gabriela Rubannelsonkumar, Eric Jin, Siyuan Zheng, Peter J Houghton, Yufei Huang, Yu-Chiao Chiu, Yidong Chen
DepLink: an R Shiny app to systematically link genetic and pharmacologic dependencies of cancer. Bioinformatics advances 3 (1) (2023)
Tapsya Nayak, Li-Ju Wang, Michael Ning, Gabriela Rubannelsonkumar, Eric Jin, Siyuan Zheng, Peter J Houghton, Yufei Huang, Yu-Chiao Chiu, Yidong Chen
DepLink: an R Shiny app to systematically link genetic and pharmacologic dependencies of cancer. Bioinformatics advances 3 (1) (2023)
Brian S Iskra, Logan Davis, Henry E Miller, Yu-Chiao Chiu, Alexander J R Bishop, Yidong Chen, Gregory J Aune
Development and characterization of a mass cytometry panel for detecting the effect of acute doxorubicin exposure on murine cardiac nonmyocytes. American journal of physiology. Heart and circulatory physiology 323 (1) (2022)
Ting-He Zhang, Md Musaddaqul Hasib, Yu-Chiao Chiu, Zhi-Feng Han, Yu-Fang Jin, Mario A Flores, Yidong Chen, Yufei Huang
Transformer for Gene Expression Modeling (T-GEM): An Interpretable Deep Learning Model for Gene Expression-Based Phenotype Predictions. Cancers 14 (19) (2022)
Mario A Flores, Zhentao Liu, Tinghe Zhang, Md Musaddaqui Hasib, Yu-Chiao Chiu, Zhenqing Ye, Karla Paniagua, Sumin Jo, Jianqiu Zhang, Shou-Jiang Gao, Yu-Fang Jin, Yidong Chen, Yufei Huang
Deep learning tackles single-cell analysis-a survey of deep learning for scRNA-seq analysis. Briefings in bioinformatics 23 (1) (2022)
Yu-Chiao Chiu, Siyuan Zheng, Li-Ju Wang, Brian S Iskra, Manjeet K Rao, Peter J Houghton, Yufei Huang, Yidong Chen
Predicting and characterizing a cancer dependency map of tumors with deep learning. Science advances 7 (34) (2021)
Chien-Chin Lin, Chi-Yuan Yao, Yueh-Chwen Hsu, Hsin-An Hou, Chang-Tsu Yuan, Yi-Hung Li, Chein-Jun Kao, Po-Han Chuang, Yu-Chiao Chiu, Yidong Chen, Wen-Chien Chou, Hwei-Fang Tien
Knock-out of Hopx disrupts stemness and quiescence of hematopoietic stem cells in mice. Oncogene 39 (28) (2020)
Feng-Ming Tien, Hsin-An Hou, Xavier Cheng-Hong Tsai, Jih-Luh Tang, Yu-Chiao Chiu, Chien-Yuan Chen, Yuan-Yeh Kuo, Mei-Hsuan Tseng, Yen-Ling Peng, Ming-Chih Liu, Chia-Wen Liu, Xiu-Wen Liao, Liang-In Lin, Chien-Ting Lin, Shang-Ju Wu, Bor Sheng Ko, Szu-Chun Hsu, Shang-Yi Huang, Ming Yao, Wen-Chien Chou, Hwei-Fang Tien
GATA2 zinc finger 1 mutations are associated with distinct clinico-biological features and outcomes different from GATA2 zinc finger 2 mutations in adult acute myeloid leukemia. Blood cancer journal 8 (9) (2018)
Yi-Tsung Yang, Yu-Chiao Chiu, Chein-Jun Kao, Hsin-An Hou, Chien-Chin Lin, Xavier Cheng-Hong Tsai, Mei-Hsuan Tseng, Wen-Chien Chou, Hwei-Fang Tien
The prognostic significance of global aberrant alternative splicing in patients with myelodysplastic syndrome. Blood cancer journal 8 (8) (2018)
Xavier Cheng-Hong Tsai, Hsin-An Hou, Jih-Luh Tang, Yuan-Yeh Kuo, Yu-Chiao Chiu, Chien-Chin Lin, Chieh-Yu Liu, Mei-Hsuan Tseng, Tzung-Yi Lin, Ming-Chih Liu, Chia-Wen Liu, Liang-In Lin, Ming Yao, Chi-Cheng Li, Shang-Yi Huang, Bor-Sheng Ko, Szu-Chun Hsu, Chien-Ting Lin, Shang-Ju Wu, Chien-Yuan Chen, Woei Tsay, Eric Y Chuang, Wen-Chien Chou, Hwei-Fang Tien
Prognostic impacts and dynamic changes of cohesin complex gene mutations in de novo acute myeloid leukemia. Blood cancer journal 7 (12) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Yu-Chiao Chiu