Yuko Okamoto

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2022
Publications (10 Years): 12

Top Topics

Circulating Tumor

Molecular Dynamics Simulations

Histone Deacetylase

Top Venues

The journal of physical chemistry. B

The Journal of chemical physics

Journal of computational chemistry

This page only lists publications with an associated author ORCID identifier.

Publications

Yoshitake Sakae, Takeshi Kawasaki, Yuko Okamoto
Distribution and Structure Analysis of Fibril-Forming Peptides Focusing on Concentration Dependency. ACS omega 7 (12) (2022)
Setsuko Nakagawa, Akihiro Kimura, Yuko Okamoto
Polarizable Molecular Block Model: Toward the Development of an Induced Dipole Force Field for DNA. The journal of physical chemistry. B (2022)
Setsuko Nakagawa, Akihiro Kimura, Yuko Okamoto
Polarizable Molecular Block Model: Toward the Development of an Induced Dipole Force Field for DNA. The journal of physical chemistry. B 126 (50) (2022)
Setsuko Nakagawa, Akihiro Kimura, Yuko Okamoto
Polarizable Molecular Block Model: Toward the Development of an Induced Dipole Force Field for DNA. The journal of physical chemistry. B 126 (50) (2022)
Setsuko Nakagawa, Akihiro Kimura, Yuko Okamoto
Polarizable Molecular Block Model: Toward the Development of an Induced Dipole Force Field for DNA. The journal of physical chemistry. B 126 (50) (2022)
Kohei Noda, Yuhei Tachi, Yuko Okamoto
Structural Characteristics of Monomeric Aβ42 on Fibril in the Early Stage of Secondary Nucleation Process. ACS chemical neuroscience 11 (19) (2020)
Masahiro Shimizu, Yukihito Kajikawa, Kunihiro Kuwajima, Christopher M Dobson, Yuko Okamoto
Determination of the structural ensemble of the molten globule state of a protein by computer simulations. Proteins 87 (8) (2019)
Yuhei Tachi, Yuko Okamoto, Hisashi Okumura
Conformational properties of an artificial GM1 glycan cluster based on a metal-ligand complex. The Journal of chemical physics 149 (13) (2018)
Yoshitake Sakae, John E Straub, Yuko Okamoto
Enhanced sampling method in molecular simulations using genetic algorithm for biomolecular systems. Journal of computational chemistry 40 (2) (2018)
Shuichiro Tsukamoto, Yoshitake Sakae, Yukihiro Itoh, Takayoshi Suzuki, Yuko Okamoto
Computational analysis for selectivity of histone deacetylase inhibitor by replica-exchange umbrella sampling molecular dynamics simulations. The Journal of chemical physics 148 (12) (2018)
Shingo Ito, Ying Wang, Yuko Okamoto, Stephan Irle
Quantum chemical replica-exchange umbrella sampling molecular dynamics simulations reveal the formation mechanism of iron phthalocyanine from iron and phthalonitrile. The Journal of chemical physics 149 (7) (2018)
Yoshiharu Mori, Yuko Okamoto
Conformational changes of ubiquitin under high pressure conditions: A pressure simulated tempering molecular dynamics study. Journal of computational chemistry 38 (15) (2017)