Zheqi Li

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 23

Top Topics

Estrogen Receptor

Top Venues

bioRxiv : the preprint server for biology

Nature cell biology

Cancer research

This page only lists publications with an associated author ORCID identifier.

Publications

Marco Seehawer, Zheqi Li, Jun Nishida, Pierre Foidart, Andrew H Reiter, Ernesto Rojas-Jimenez, Marie-Anne Goyette, Pengze Yan, Shaunak Raval, Miguel Munoz Gomez, Paloma Cejas, Henry W Long, Malvina Papanastasiou, Kornelia Polyak
Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3. Nature cell biology 26 (7) (2024)
Marco Seehawer, Zheqi Li, Jun Nishida, Pierre Foidart, Andrew H Reiter, Ernesto Rojas-Jimenez, Marie-Anne Goyette, Pengze Yan, Shaunak Raval, Miguel Munoz Gomez, Paloma Cejas, Henry W Long, Malvina Papanastasiou, Kornelia Polyak
Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3. Nature cell biology 26 (7) (2024)
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V Lee, George C Tseng
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies. bioRxiv : the preprint server for biology (2024)
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V Lee, George C Tseng
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies. bioRxiv : the preprint server for biology (2024)
Marco Seehawer, Zheqi Li, Jun Nishida, Pierre Foidart, Andrew H Reiter, Ernesto Rojas-Jimenez, Marie-Anne Goyette, Pengze Yan, Shaunak Raval, Miguel Munoz Gomez, Paloma Cejas, Henry W Long, Malvina Papanastasiou, Kornelia Polyak
Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3. Nature cell biology 26 (7) (2024)
Marco Seehawer, Zheqi Li, Jun Nishida, Pierre Foidart, Andrew H Reiter, Ernesto Rojas-Jimenez, Marie-Anne Goyette, Pengze Yan, Shaunak Raval, Miguel Munoz Gomez, Paloma Cejas, Henry W Long, Malvina Papanastasiou, Kornelia Polyak
Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3. Nature cell biology (2024)
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V Lee, George C Tseng
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies. bioRxiv : the preprint server for biology (2024)
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V Lee, George C Tseng
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies. bioRxiv : the preprint server for biology (2024)
Megan E Yates, Hunter Waltermire, Kanako Mori, Zheqi Li, Yiting Li, Hannah Guzolik, Xiao-Song Wang, Tiantong Liu, Jennifer M Atkinson, Jagmohan Hooda, Adrian V Lee, Steffi Oesterreich
ESR1 fusions invoke breast cancer subtype-dependent enrichment of ligand independent oncogenic signatures and phenotypes. Endocrinology (2024)
Zheqi Li, Fangyuan Chen, Li Chen, Jiebin Liu, Danielle Tseng, Fazal Hadi, Soleilmane Omarjee, Kamal Kishore, Joshua Kent, Joanna Kirkpatrick, Clive D'Santos, Mandy Lawson, Jason Gertz, Matthew J Sikora, Donald P McDonnell, Jason S Carroll, Kornelia Polyak, Steffi Oesterreich, Adrian V Lee
EstroGene2.0: A multi-omic database of response to estrogens, ER-modulators, and resistance to endocrine therapies in breast cancer. bioRxiv : the preprint server for biology (2024)
Zheqi Li, Fangyuan Chen, Li Chen, Jiebin Liu, Danielle Tseng, Fazal Hadi, Soleilmane Omarjee, Kamal Kishore, Joshua Kent, Joanna Kirkpatrick, Clive D'Santos, Mandy Lawson, Jason Gertz, Matthew J Sikora, Donald P McDonnell, Jason S Carroll, Kornelia Polyak, Steffi Oesterreich, Adrian V Lee
EstroGene2.0: A multi-omic database of response to estrogens, ER-modulators, and resistance to endocrine therapies in breast cancer. bioRxiv : the preprint server for biology (2024)
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V Lee, George C Tseng
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies. bioRxiv : the preprint server for biology (2024)
Megan E Yates, Hunter Waltermire, Kanako Mori, Zheqi Li, Yiting Li, Hannah Guzolik, Xiao-Song Wang, Tiantong Liu, Jennifer M Atkinson, Jagmohan Hooda, Adrian V Lee, Steffi Oesterreich
ESR1 fusions invoke breast cancer subtype-dependent enrichment of ligand independent oncogenic signatures and phenotypes. Endocrinology (2024)
Marco Seehawer, Zheqi Li, Jun Nishida, Pierre Foidart, Andrew H Reiter, Ernesto Rojas-Jimenez, Marie-Anne Goyette, Pengze Yan, Shaunak Raval, Miguel Munoz Gomez, Paloma Cejas, Henry W Long, Malvina Papanastasiou, Kornelia Polyak
Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3. Nature cell biology 26 (7) (2024)
Zheqi Li, Tianqin Li, Megan E Yates, Yang Wu, Amanda Ferber, Lyuqin Chen, Daniel D Brown, Jason S Carroll, Matthew J Sikora, George C Tseng, Steffi Oesterreich, Adrian V Lee
EstroGene database reveals diverse temporal, context-dependent and directional estrogen receptor regulomes in breast cancer. bioRxiv : the preprint server for biology (2023)
Zheqi Li, Tianqin Li, Megan E Yates, Yang Wu, Amanda Ferber, Lyuqin Chen, Daniel D Brown, Jason S Carroll, Matthew J Sikora, George C Tseng, Steffi Oesterreich, Adrian V Lee
The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer. Cancer research (2023)
Yang Wu, Zheqi Li, Abdalla M Wedn, Allison N Casey, Daniel D Brown, Shalini V Rao, Soleilmane Omarjee, Jagmohan Hooda, Jason S Carroll, Jason Gertz, Jennifer M Atkinson, Adrian V Lee, Steffi Oesterreich
FOXA1 reprogramming dictates retinoid X receptor response in ESR1 mutant breast cancer. Molecular cancer research : MCR (2023)
Zheqi Li, Tianqin Li, Megan E Yates, Yang Wu, Amanda Ferber, Lyuqin Chen, Daniel D Brown, Jason S Carroll, Matthew J Sikora, George C Tseng, Steffi Oesterreich, Adrian V Lee
EstroGene database reveals diverse temporal, context-dependent and directional estrogen receptor regulomes in breast cancer. bioRxiv : the preprint server for biology (2023)
Megan E Yates, Zheqi Li, Yiting Li, Hannah Guzolik, Xiaosong Wang, Tiantong Liu, Jagmohan Hooda, Jennifer M Atkinson, Adrian V Lee, Steffi Oesterreich
ESR1 fusion proteins invoke breast cancer subtype-dependent enrichment of ligand independent pro-oncogenic signatures and phenotypes. bioRxiv : the preprint server for biology (2023)
Zheqi Li, Tianqin Li, Megan E Yates, Yang Wu, Amanda Ferber, Lyuqin Chen, Daniel D Brown, Jason S Carroll, Matthew J Sikora, George C Tseng, Steffi Oesterreich, Adrian V Lee
EstroGene database reveals diverse temporal, context-dependent and directional estrogen receptor regulomes in breast cancer. bioRxiv : the preprint server for biology (2023)
Zheqi Li, Tianqin Li, Megan E Yates, Yang Wu, Amanda Ferber, Lyuqin Chen, Daniel D Brown, Jason S Carroll, Matthew J Sikora, George C Tseng, Steffi Oesterreich, Adrian V Lee
EstroGene database reveals diverse temporal, context-dependent and directional estrogen receptor regulomes in breast cancer. bioRxiv : the preprint server for biology (2023)
Maša Alečković, Zheqi Li, Ningxuan Zhou, Xintao Qiu, Bethlehem A Lulseged, Pierre Foidart, Xiao-Yun Huang, Kodie Garza, Shaokun Shu, Nikolas Kesten, Rong Li, Klothilda Lim, Ana Christina Garrido-Castro, Jennifer L Guerriero, Jun Qi, Henry W Long, Kornelia Polyak
Combination therapies to improve the efficacy of immunotherapy in triple-negative breast cancer. Molecular cancer therapeutics (2023)
Laura E Stevens, Guillermo Peluffo, Xintao Qiu, Daniel Temko, Anne Fassl, Zheqi Li, Anne Trinh, Marco Seehawer, Bojana Jovanovic, Maša Alečković, Callahan M Wilde, Renee C Geck, Shaokun Shu, Natalie L Kingston, Nicholas W Harper, Vanessa Almendro, Alanna L Pyke, Shawn B Egri, Malvina Papanastasiou, M Kendell Clement, Ningxuan Zhou, Sarah R Walker, Jacqueline Salas, So Yeon Park, David A Frank, Alexander Meissner, Jacob D Jaffe, Piotr Sicinski, Alex Toker, Franziska Michor, Henry W Long, Beth A Overmoyer, Kornelia Polyak
JAK-STAT signaling in inflammatory breast cancer enables chemotherapy-resistant cell states. Cancer research (2022)