Zilin Song

Publication Activity (10 Years)

Years Active: 2020-2023
Publications (10 Years): 9

Top Topics

Machine Learning

Klebsiella Pneumoniae

Anaerobic Digestion

Molecular Dynamics

Top Venues

Physical chemistry chemical physics : PCCP

Communications chemistry

Organic & biomolecular chemistry

ACS Physical Chemistry Au

This page only lists publications with an associated author ORCID identifier.

Publications

Zilin Song, Ye Ding, Jing Huang
Constant advance replicas method for locating minimum energy paths and transition states. Journal of computational chemistry (2023)
Chao Yin, Zilin Song, Hao Tian, Timothy G Palzkill, Peng Tao
Unveiling the structural features that regulate carbapenem deacylation in KPC-2 through QM/MM and interpretable machine learning. Physical chemistry chemical physics : PCCP 25 (2) (2023)
Chao Yin, Zilin Song, Hao Tian, Timothy G Palzkill, Peng Tao
Unveiling the structural features that regulate carbapenem deacylation in KPC-2 through QM/MM and interpretable machine learning. Physical chemistry chemical physics : PCCP 25 (2) (2023)
Chao Yin, Zilin Song, Hao Tian, Timothy G Palzkill, Peng Tao
Unveiling the structural features that regulate carbapenem deacylation in KPC-2 through QM/MM and interpretable machine learning. Physical chemistry chemical physics : PCCP (2022)
Francesco Trozzi, Nischal Karki, Zilin Song, Niraj Verma, Elfi Kraka, Brian D Zoltowski, Peng Tao
Allosteric control of ACE2 peptidase domain dynamics. Organic & biomolecular chemistry 20 (17) (2022)
Zilin Song, Francesco Trozzi, Hao Tian, Chao Yin, Peng Tao
Mechanistic Insights into Enzyme Catalysis from Explaining Machine-Learned Quantum Mechanical and Molecular Mechanical Minimum Energy Pathways. ACS Physical Chemistry Au 2 (4) (2022)
Zilin Song, Francesco Trozzi, Timothy Palzkill, Peng Tao
QM/MM modeling of class A β-lactamases reveals distinct acylation pathways for ampicillin and cefalexin. Organic & biomolecular chemistry 19 (42) (2021)
Zilin Song, Hongyu Zhou, Hao Tian, Xinlei Wang, Peng Tao
Unraveling the energetic significance of chemical events in enzyme catalysis via machine-learning based regression approach. Communications chemistry 3 (1) (2020)
Zilin Song, Hongyu Zhou, Hao Tian, Xinlei Wang, Peng Tao
Unraveling the energetic significance of chemical events in enzyme catalysis via machine-learning based regression approach. Communications chemistry 3 (1) (2020)