Distinct senescence mechanisms restrain progression of dysplastic nevi.
Franziska K LorbeerGabrielle RieserAditya GoelMeng WangAreum OhIwei YehBoris C BastianDirk HockemeyerPublished in: PNAS nexus (2024)
Telomerase reverse transcriptase (TERT) promoter mutations (TPMs) are frequently found in different cancer types, including ∼70% of sun-exposed skin melanomas. In melanoma, TPMs are among the earliest mutations and can be present during the transition from nevus to melanoma. However, the specific factors that contribute to the selection of TPMs in certain nevi subsets are not well understood. To investigate this, we analyzed a group of dysplastic nevi (DN) by sequencing genes commonly mutated in melanocytic neoplasms. We examined the relationship between the identified mutations, patient age, telomere length, histological features, and the expression of p16. Our findings reveal that TPMs are more prevalent in DN from older patients and are associated with shorter telomeres. Importantly, these TPMs were not found in nevi with BRAF V600E mutations. Conversely, DN with BRAF V600E mutations were observed in younger patients, had longer telomeres and a higher proportion of p16-positive cells. This suggests that these nevi arrest growth independently of telomere shortening through a mechanism known as oncogene-induced senescence (OIS). These characteristics extend to melanoma-sequencing datasets, where melanomas with BRAF V600E mutations were more likely to have a CDKN2A inactivation, overriding OIS. In contrast, melanomas without BRAF V600E mutations showed a higher frequency of TPMs. Our data imply that TPMs are selected to bypass replicative senescence (RS) in cells that were not arrested by OIS. Overall, our results indicate that a subset of melanocytic neoplasms face constraints from RS, while others encounter OIS and RS. The order in which these barriers are overcome during progression to melanoma depends on the mutational context.
Keyphrases
- endothelial cells
- dna damage
- single cell
- end stage renal disease
- magnetic resonance
- poor prognosis
- gene expression
- newly diagnosed
- genome wide
- cell proliferation
- chronic kidney disease
- machine learning
- cell cycle arrest
- metastatic colorectal cancer
- magnetic resonance imaging
- skin cancer
- wild type
- young adults
- squamous cell carcinoma
- high glucose
- case report
- papillary thyroid
- big data
- deep learning
- peritoneal dialysis
- drug induced
- artificial intelligence