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Reconstructing Complex Cancer Evolutionary Histories from Multiple Bulk DNA Samples Using Pairtree.

Jeff A WintersingerStephanie M DobsonEthan KulmanLincoln D SteinJohn E DickQuaid Morris
Published in: Blood cancer discovery (2022)
Clone trees illustrate the evolutionary history of a cancer and can provide insights into how the disease changed through time (e.g., between diagnosis and relapse). Pairtree uses DNA-sequencing data from many samples of the same cancer to build more detailed and accurate clone trees than previously possible. See related commentary by Miller, p. 176. This article is highlighted in the In This Issue feature, p. 171.
Keyphrases
  • papillary thyroid
  • squamous cell
  • circulating tumor
  • lymph node metastasis
  • machine learning
  • genome wide
  • squamous cell carcinoma
  • high resolution
  • childhood cancer
  • deep learning
  • data analysis