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Disruption of Ca 2+ /calmodulin:KSR1 interaction lowers ERK activation.

Louise ThinesHyunbum JangZhigang LiSamar SayedyahosseinRyan MaloneyRuth NussinovDavid B Sacks
Published in: Protein science : a publication of the Protein Society (2024)
KSR1, a key scaffold protein for the MAPK pathway, facilitates ERK activation upon growth factor stimulation. We recently demonstrated that KSR1 binds the Ca 2+ -binding protein calmodulin (CaM), thereby providing an intersection between KSR1-mediated and Ca 2+ signaling. In this study, we set out to generate a KSR1 point mutant with reduced Ca 2+ /CaM binding in order to unravel the functional implications of their interaction. To do so, we solved the structural determinants of complex formation. Using purified fragments of KSR1, we showed that Ca 2+ /CaM binds to the CA3 domain of KSR1. We then used in silico molecular modeling to predict contact residues for binding. This approach identified two possible modes of interaction: (1) binding of extended Ca 2+ /CaM to a globular conformation of KSR1-CA3 via electrostatic interactions or (2) binding of collapsed Ca 2+ /CaM to α-helical KSR1-CA3 via hydrophobic interactions. Experimentally, site-directed mutagenesis of the predicted contact residues for the two binding models favored that where collapsed Ca 2+ /CaM binds to the α-helical conformation of KSR1-CA3. Importantly, replacing KSR1-Phe 355 with Asp reduces Ca 2+ /CaM binding by 76%. The KSR1-F 355 D mutation also significantly impairs the ability of EGF to activate ERK, which reveals that Ca 2+ /CaM binding promotes KSR1-mediated MAPK signaling. This work, by uncovering structural insight into the binding of KSR1 to Ca 2+ /CaM, identifies a KSR1 single-point mutant as a bioreagent to selectively study the crosstalk between Ca 2+ and KSR1-mediated signaling.
Keyphrases
  • protein kinase
  • binding protein
  • growth factor
  • signaling pathway
  • cell proliferation
  • dna methylation
  • pi k akt
  • oxidative stress
  • dna binding
  • molecular dynamics simulations
  • crystal structure