Structural Determinants and Functional Significance of Dimerization for Osmosensing Transporter ProP in Escherichia coli .
Tugba Nur OzturkChelsea CoumoundourosDoreen E CulhamJanet M WoodPublished in: Biochemistry (2022)
Osmosensing transporter ProP forestalls cellular dehydration by detecting environments with high osmotic pressure and mediating the accumulation of organic osmolytes by bacterial cells. It is composed of 12 transmembrane helices with cytoplasmic N- and C-termini. In Escherichia coli , dimers form when the C-terminal domains of ProP molecules form homodimeric, antiparallel, α-helical coiled coils. No dominant negative effect was detected when inactive and active ProP molecules formed heterodimers in vivo. Purification of ProP in detergent dodecylmaltoside yielded monomers, which were functional after reconstitution in proteoliposomes. With other evidence, this suggests that ProP monomers function independently whether in the monomeric or dimeric state. Amino acid replacements that disrupted or reversed the coiled coil did not prevent in vivo dimerization of ProP detected with a bacterial two-hybrid system. Maleimide labeling detected no osmolality-dependent variation in the reactivities of cysteine residues introduced to transmembrane helix (TM) XII. In contrast, coarse-grained molecular dynamic simulations detected deformation of the lipid around TMs III and VI, on the lipid-exposed protein surface opposite to TM XII. This suggests that the dimer interface of ProP includes the surfaces of TMs III and VI, not of TM XII as previously suggested by crosslinking data. Homology modeling suggested that coiled-coil formation and dimerization via such an interface are not mutually exclusive. In previous work, alterations to the C-terminal coiled coil blocked co-localization of ProP with phospholipid cardiolipin at E. coli cell poles. Thus, dimerization may contribute to ProP targeting, adjust its lipid environment, and hence indirectly modify its osmotic stress response.
Keyphrases
- escherichia coli
- molecular dynamics
- fatty acid
- amino acid
- oxidative stress
- magnetic resonance
- single cell
- machine learning
- induced apoptosis
- signaling pathway
- biofilm formation
- pseudomonas aeruginosa
- electronic health record
- transcription factor
- cancer therapy
- klebsiella pneumoniae
- mesenchymal stem cells
- cell proliferation
- resting state
- single molecule
- data analysis
- endoplasmic reticulum stress