Genome-wide annotation of protein-coding genes in pig.
Max KarlssonEvelina SjöstedtPer OksvoldÅsa SivertssonJinrong HuangMaría Bueno ÁlvezMuhammad ArifXiangyu LiLin LinJiaying YuTao MaFengping XuPeng HanHui JiangAdil MardinogluCheng ZhangKalle von FeilitzenXun XuJian WangHuanming YangLars BolundWen ZhongLinn FagerbergCecilia LindskogFredrik PonténJan MulderYonglun LuoMathias UhlenPublished in: BMC biology (2022)
Here, we present a new genome-wide annotation strategy based on dimensionality reduction and density-based clustering. A genome-wide resource of the transcriptome map across all major tissues and organs in pig is presented, and the data is available as an open-access resource ( www.rnaatlas.org ), including a comparison to the expression of human orthologs.