Automated Segmentation and Measurements of Pulmonary Cysts in Lymphangioleiomyomatosis across Multiple CT Scanner Platforms over a Period of Two Decades.
Simone LeeAlfredo LebronBrianna MatthewJoel MossHan WenPublished in: Bioengineering (Basel, Switzerland) (2023)
(1) Background: Lymphangioleiomyomatosis is a genetic disease that affects mostly women of childbearing age. In the lungs, it manifests as the progressive formation of air-filled cysts and is associated with a decline in lung function. With a median survival of 29 years after the onset of symptoms, computed-tomographic monitoring of cystic changes in the lungs is a key part of the management of the disease. However, the current standard method to measure cyst burdens from CT is semi-automatic and requires manual adjustments from trained operators to obtain consistent results due to variabilities in CT technology and imaging conditions over the long course of the disease. This can be impractical for longitudinal studies involving large numbers of scans and is susceptible to subjective biases. (2) Methods: We developed an automated method of pulmonary cyst segmentation for chest CT images incorporating novel graphics processing algorithms. We assessed its performance against the gold-standard semi-automated method performed by experienced operators who were blinded to the results of the automated method. (3) Results: the automated method had the same consistency over time as the gold-standard method, but its cyst scores were more strongly correlated with concurrent pulmonary function results from the physiology laboratory than those of the gold-standard method. (4) Conclusions: The automated cyst segmentation is a competent replacement for the gold-standard semi-automated process. It is a solution for saving time and labor in clinical studies of lymphangioleiomyomatosis that may involve large numbers of chest CT scans from diverse scanner platforms and protocols.
Keyphrases
- deep learning
- machine learning
- computed tomography
- image quality
- dual energy
- contrast enhanced
- high throughput
- convolutional neural network
- lung function
- magnetic resonance imaging
- pulmonary hypertension
- multiple sclerosis
- high resolution
- chronic obstructive pulmonary disease
- cystic fibrosis
- positron emission tomography
- magnetic resonance
- air pollution
- clinical trial
- gene expression
- pregnant women
- mass spectrometry
- body composition
- adipose tissue
- metabolic syndrome
- resistance training
- squamous cell carcinoma
- polycystic ovary syndrome
- pregnancy outcomes
- locally advanced
- silver nanoparticles
- pet ct
- cross sectional