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eTOX ALLIES: an automated pipeLine for linear interaction energy-based simulations.

Luigi CapoferriMarc van DijkAriën S RustenburgTsjerk A WassenaarDerk P KooiEko Aditya RifaiNico P E VermeulenDaan P Geerke
Published in: Journal of cheminformatics (2017)
Because of the user-friendliness, efficiency and free-software licensing, eTOX ALLIES represents a novel extension of the toolbox for computational chemists, pharmaceutical scientists and toxicologists, who are interested in fast affinity predictions of small molecules toward biological (off-)targets for which protein flexibility, solvent and binding site interactions directly affect the strength of ligand-protein binding.
Keyphrases
  • binding protein
  • protein protein
  • molecular dynamics
  • data analysis