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Characterization of CoCas9 nuclease from Capnocytophaga ochracea .

A VasilevaP SelkovaA ArsenievM AbramovaN ShcheglovaO MusharovaI MizgirevT ArtamonovaM KhodorkovskiiK SeverinovIana Fedorova
Published in: RNA biology (2023)
Cas9 nucleases are widely used for genome editing and engineering. Cas9 enzymes encoded by CRISPR-Cas defence systems of various prokaryotic organisms possess different properties such as target site preferences, size, and DNA cleavage efficiency. Here, we biochemically characterized CoCas9 from Capnocytophaga ochracea , a bacterium that inhabits the oral cavity of humans and contributes to plaque formation on teeth. CoCas9 recognizes a novel 5'-NRRWC-3' PAM and efficiently cleaves DNA in vitro . Functional characterization of CoCas9 opens ways for genetic engineering of C. ochracea using its endogenous CRISPR-Cas system. The novel PAM requirement makes CoCas9 potentially useful in genome editing applications.
Keyphrases
  • genome editing
  • crispr cas
  • circulating tumor
  • cell free
  • single molecule
  • dna binding
  • coronary artery disease
  • nucleic acid
  • genome wide
  • dna methylation
  • cone beam computed tomography