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Structural basis of DNA synthesis opposite 8-oxoguanine by human PrimPol primase-polymerase.

Olga RechkoblitRobert E JohnsonYogesh K GuptaLouise PrakashSatya PrakashAneel K Aggarwal
Published in: Nature communications (2021)
PrimPol is a human DNA polymerase-primase that localizes to mitochondria and nucleus and bypasses the major oxidative lesion 7,8-dihydro-8-oxoguanine (oxoG) via translesion synthesis, in mostly error-free manner. We present structures of PrimPol insertion complexes with a DNA template-primer and correct dCTP or erroneous dATP opposite the lesion, as well as extension complexes with C or A as a 3'-terminal primer base. We show that during the insertion of C and extension from it, the active site is unperturbed, reflecting the readiness of PrimPol to accommodate oxoG(anti). The misinsertion of A opposite oxoG(syn) also does not alter the active site, and is likely less favorable due to lower thermodynamic stability of the oxoG(syn)•A base-pair. During the extension step, oxoG(syn) induces an opening of its base-pair with A or misalignment of the 3'-A primer terminus. Together, the structures show how PrimPol accurately synthesizes DNA opposite oxidatively damaged DNA in human cells.
Keyphrases
  • circulating tumor
  • structural basis
  • cell free
  • single molecule
  • endothelial cells
  • nucleic acid
  • high resolution
  • cell death
  • circulating tumor cells
  • reactive oxygen species
  • endoplasmic reticulum
  • solid phase extraction