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Fungal indole alkaloid biogenesis through evolution of a bifunctional reductase/Diels-Alderase.

Qingyun DanSean A NewmisterKimberly R KlasAmy E FraleyTimothy J McAfoosAmber D SomozaJames D SunderhausYing YeVikram V ShendeFengan YuJacob N SandersW Clay BrownLe ZhaoRobert S PatonK N HoukJanet L SmithDavid H ShermanRobert M Williams
Published in: Nature chemistry (2019)
Prenylated indole alkaloids such as the calmodulin-inhibitory malbrancheamides and anthelmintic paraherquamides possess great structural diversity and pharmaceutical utility. Here, we report complete elucidation of the malbrancheamide biosynthetic pathway accomplished through complementary approaches. These include a biomimetic total synthesis to access the natural alkaloid and biosynthetic intermediates in racemic form and in vitro enzymatic reconstitution to provide access to the natural antipode (+)-malbrancheamide. Reductive cleavage of an L-Pro-L-Trp dipeptide from the MalG non-ribosomal peptide synthetase (NRPS) followed by reverse prenylation and a cascade of post-NRPS reactions culminates in an intramolecular [4+2] hetero-Diels-Alder (IMDA) cyclization to furnish the bicyclo[2.2.2]diazaoctane scaffold. Enzymatic assembly of optically pure (+)-premalbrancheamide involves an unexpected zwitterionic intermediate where MalC catalyses enantioselective cycloaddition as a bifunctional NADPH-dependent reductase/Diels-Alderase. The crystal structures of substrate and product complexes together with site-directed mutagenesis and molecular dynamics simulations demonstrate how MalC and PhqE (its homologue from the paraherquamide pathway) catalyse diastereo- and enantioselective cyclization in the construction of this important class of secondary metabolites.
Keyphrases
  • molecular dynamics simulations
  • hydrogen peroxide
  • molecular docking
  • highly efficient
  • ms ms
  • crispr cas
  • reactive oxygen species
  • dna binding
  • transcription factor