Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula.

Sara A KnaackDaniel CondeSanhita ChakrabortyKelly M BalmantThomas B IrvingLucas Gontijo Silva MaiaPaolo M TriozziChristopher DervinisWendell J PereiraJunko MaedaHenry W SchmidtJean-Michel AnéMatias KirstSushmita Roy

Published in: BMC biology (2022)

Our transcriptomic and chromatin accessibility datasets provide a valuable resource to understand the gene regulatory programs controlling the early stages of the dynamic process of symbiosis. The regulators identified provide potential targets for future experimental validation, and the engineering of nodulation in species is unable to establish that symbiosis naturally.

Keyphrases

transcription factor
dna damage
gene expression
rna seq
genome wide
single cell
public health
current status
oxidative stress
genetic diversity