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In the twilight zone of protein sequence homology: do protein language models learn protein structure?

Anowarul KabirAsher MoldwinYana BrombergAmarda Shehu
Published in: Bioinformatics advances (2024)
We believe this opens the way for further research both on remote homology prediction and on the broader goal of learning sequence- and structure-rich representations of protein molecules. All code, data, and models are made publicly available.
Keyphrases
  • amino acid
  • protein protein
  • binding protein
  • autism spectrum disorder
  • small molecule
  • machine learning
  • electronic health record