Login / Signup

A biologist's guide to planning and performing quantitative bioimaging experiments.

Rebecca A SenftBarbara Diaz-RohrerPina ColarussoLucy SwiftNasim JamaliHelena JamborThomas PengoCraig BrideauPaula Montero LlopisVirginie UhlmannJason KirkKevin Andrew GonzalesPeter BankheadEdward L EvansKevin W EliceiriBeth A Cimini
Published in: PLoS biology (2023)
Technological advancements in biology and microscopy have empowered a transition from bioimaging as an observational method to a quantitative one. However, as biologists are adopting quantitative bioimaging and these experiments become more complex, researchers need additional expertise to carry out this work in a rigorous and reproducible manner. This Essay provides a navigational guide for experimental biologists to aid understanding of quantitative bioimaging from sample preparation through to image acquisition, image analysis, and data interpretation. We discuss the interconnectedness of these steps, and for each, we provide general recommendations, key questions to consider, and links to high-quality open-access resources for further learning. This synthesis of information will empower biologists to plan and execute rigorous quantitative bioimaging experiments efficiently.
Keyphrases
  • high resolution
  • quantum dots
  • fluorescent probe
  • living cells
  • healthcare
  • minimally invasive
  • machine learning
  • mass spectrometry
  • electronic health record
  • deep learning
  • cross sectional