Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Elizabeth J BlaesiGavin M PalowitchKai HuAmelia J KimHannah R RoseRahul AlapatiMarshall G LougeeHee Jong KimAlexander T TaguchiKong Ooi TanTatiana N LaremoreRobert G GriffinCarsten KrebsMegan L MatthewsAlexey SilakovJ Martin BollingerBenjamin D AllenAmie K BoalPublished in: Proceedings of the National Academy of Sciences of the United States of America (2018)
All cells obtain 2'-deoxyribonucleotides for DNA synthesis through the activity of a ribonucleotide reductase (RNR). The class I RNRs found in humans and pathogenic bacteria differ in (i) use of Fe(II), Mn(II), or both for activation of the dinuclear-metallocofactor subunit, β; (ii) reaction of the reduced dimetal center with dioxygen or superoxide for this activation; (iii) requirement (or lack thereof) for a flavoprotein activase, NrdI, to provide the superoxide from O2; and (iv) use of either a stable tyrosyl radical or a high-valent dimetal cluster to initiate each turnover by oxidizing a cysteine residue in the α subunit to a radical (Cys•). The use of manganese by bacterial class I, subclass b-d RNRs, which contrasts with the exclusive use of iron by the eukaryotic Ia enzymes, appears to be a countermeasure of certain pathogens against iron deprivation imposed by their hosts. Here, we report a metal-free type of class I RNR (subclass e) from two human pathogens. The Cys• in its α subunit is generated by a stable, tyrosine-derived dihydroxyphenylalanine radical (DOPA•) in β. The three-electron oxidation producing DOPA• occurs in Escherichia coli only if the β is coexpressed with the NrdI activase encoded adjacently in the pathogen genome. The independence of this new RNR from transition metals, or the requirement for a single metal ion only transiently for activation, may afford the pathogens an even more potent countermeasure against transition metal-directed innate immunity.
Keyphrases
- gram negative
- transition metal
- escherichia coli
- antimicrobial resistance
- hydrogen peroxide
- multidrug resistant
- induced apoptosis
- protein kinase
- cell free
- gene expression
- nitric oxide
- dna methylation
- cell cycle arrest
- staphylococcus aureus
- candida albicans
- bone mineral density
- body composition
- pseudomonas aeruginosa
- biofilm formation
- aqueous solution