A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome.
Karla MisselbeckSilvia ParoloFrancesca LorenziniValeria SavocaLorena LeonardelliPranami BoraMelissa J MorineMaria Caterina MioneEnrico DomeniciCorrado PriamiPublished in: Nature communications (2019)
Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation.
Keyphrases
- metabolic syndrome
- insulin resistance
- high fat diet induced
- network analysis
- type diabetes
- cardiovascular disease
- risk factors
- uric acid
- adipose tissue
- cardiovascular risk factors
- chronic lymphocytic leukemia
- randomized controlled trial
- blood pressure
- skeletal muscle
- drug induced
- oxidative stress
- systematic review
- weight loss
- gene expression
- dna methylation
- tyrosine kinase
- genome wide
- combination therapy
- physical activity