Genome-wide meta-analyses of restless legs syndrome yield insights into genetic architecture, disease biology and risk prediction.
Barbara SchormairChen ZhaoSteven BellMaria DidriksenMuhammad S NawazNathalie SchandraAmbra StefaniBirgit HöglYves DauvilliersCornelius G BachmannDavid KemlinkKarel SonkaWalter PaulusClaudia TrenkwalderWolfgang H OertelMagdolna HornyakMaris Teder-LavingAndres MetspaluGeorgios M HadjigeorgiouOlli PoloIngo FietzeOwen A RossZbigniew K WszolekAbubaker IbrahimMelanie BergmannVolker KittkePhilip HarrerJoseph DowsettSofiene CheniniSisse Rye OstrowskiErik SørensenChristian ErikstrupOle Birger Vesterager PedersenMie Topholm BruunKaspar R NielsenAdam S ButterworthNicole SoranzoWillem Hendrik OuwehandDavid J RobertsJohn DaneshBrendan BurchellNicholas A FurlottePriyanka Nandakumarnull nullnull nullChristopher J EarleyWilliam G OndoLan XiongAlex DesautelsMarkus PerolaPavel VodickaChristian DinaMonika StollAndre FrankeWolfgang LiebAlexandre F R StewartSvati H ShahChristian GiegerAnnette PetersDavid B RyeGuy A RouleauKlaus BergerHreinn StefanssonHenrik UllumKari StefanssonDavid A HindsEmanuele Di AngelantonioKonrad OexleJuliane WinkelmannPublished in: Nature genetics (2024)
Restless legs syndrome (RLS) affects up to 10% of older adults. Their healthcare is impeded by delayed diagnosis and insufficient treatment. To advance disease prediction and find new entry points for therapy, we performed meta-analyses of genome-wide association studies in 116,647 individuals with RLS (cases) and 1,546,466 controls of European ancestry. The pooled analysis increased the number of risk loci eightfold to 164, including three on chromosome X. Sex-specific meta-analyses revealed largely overlapping genetic predispositions of the sexes (r g = 0.96). Locus annotation prioritized druggable genes such as glutamate receptors 1 and 4, and Mendelian randomization indicated RLS as a causal risk factor for diabetes. Machine learning approaches combining genetic and nongenetic information performed best in risk prediction (area under the curve (AUC) = 0.82-0.91). In summary, we identified targets for drug development and repurposing, prioritized potential causal relationships between RLS and relevant comorbidities and risk factors for follow-up and provided evidence that nonlinear interactions are likely relevant to RLS risk prediction.
Keyphrases
- meta analyses
- genome wide
- copy number
- systematic review
- dna methylation
- genome wide association
- randomized controlled trial
- healthcare
- machine learning
- type diabetes
- cardiovascular disease
- case report
- genome wide association study
- metabolic syndrome
- stem cells
- transcription factor
- gene expression
- deep learning
- rna seq
- health insurance
- smoking cessation
- affordable care act