Identification of Rare Genetic Variants in Familial Spontaneous Coronary Artery Dissection and Evidence for Shared Biological Pathways.
Tamiel N TurleyJeanne L TheisJared M EvansZachary C FogartyRajiv GulatiSharonne N HayesMarysia S TweetTimothy M OlsonPublished in: Journal of cardiovascular development and disease (2023)
Rare familial spontaneous coronary artery dissection (SCAD) kindreds implicate genetic disease predisposition and provide a unique opportunity for candidate gene discovery. Whole-genome sequencing was performed in fifteen probands with non-syndromic SCAD who had a relative with SCAD, eight of whom had a second relative with extra-coronary arteriopathy. Co-segregating variants and associated genes were prioritized by quantitative variant, gene, and disease-level metrics. Curated public databases were queried for functional relationships among encoded proteins. Fifty-four heterozygous coding variants in thirteen families co-segregated with disease and fulfilled primary filters of rarity, gene variation constraint, and predicted-deleterious protein effect. Secondary filters yielded 11 prioritized candidate genes in 12 families, with high arterial tissue expression ( n = 7), high-confidence protein-level interactions with genes associated with SCAD previously ( n = 10), and/or previous associations with connective tissue disorders and aortopathies ( n = 3) or other vascular phenotypes in mice or humans ( n = 11). High-confidence associations were identified among 10 familial SCAD candidate-gene-encoded proteins. A collagen-encoding gene was identified in five families, two with distinct variants in COL4A2. Familial SCAD is genetically heterogeneous, yet perturbations of extracellular matrix, cytoskeletal, and cell-cell adhesion proteins implicate common disease-susceptibility pathways. Incomplete penetrance and variable expression suggest genetic or environmental modifiers.
Keyphrases
- copy number
- genome wide
- coronary artery
- genome wide identification
- early onset
- extracellular matrix
- dna methylation
- poor prognosis
- pulmonary artery
- coronary artery disease
- binding protein
- cell adhesion
- metabolic syndrome
- emergency department
- heart failure
- long non coding rna
- type diabetes
- cell therapy
- gene expression
- high resolution
- small molecule
- single cell
- mesenchymal stem cells
- risk assessment
- protein protein
- skeletal muscle
- atrial fibrillation
- big data
- pulmonary arterial hypertension
- wound healing