Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations.
Michelle DayaNicholas RafaelsTonya M BrunettiSameer ChavanAlbert M LevinAniket ShettyChristopher R GignouxMeher Preethi BoorgulaGenevieve L WojcikMonica CampbellCandelaria VergaraDara G TorgersonVictor E OrtegaAyo DoumateyHenry Richard JohnstonNathalie AcevedoMaria Ilma AraujoPedro C AvilaGillian BelbinEugene BleeckerCarlos BustamanteLuis CaraballoAlvaro CruzGeorgia M DunstonCeleste EngMezbah U FaruqueTrevor S FergusonCamila FigueiredoJean G FordWeiniu GanPierre-Antoine GourraudNadia N HanselRyan D HernandezEdwin Francisco Herrera-PazSilvia JiménezEimear E KennyJennifer Knight-MaddenRajesh KumarLeslie A LangeEthan M LangeAntoine LizeePissamai MaulTrevor MaulAlvaro MayorgaDeborah MeyersDan L NicolaeTimothy D O'ConnorRicardo Riccio OliveiraChristopher O OlopadeOlufunmilayo OlopadeZhaohui S QinCharles N RotimiNicolas VinceHarold WatsonRainford J WilksJames G WilsonSteven L SalzbergCarole OberEsteban G BurchardL Keoki WilliamsTerri H BeatyMargaret A TaubIngo RuczinskiRasika A MathiasKathleen C Barnesnull nullPublished in: Nature communications (2019)
Asthma is a complex disease with striking disparities across racial and ethnic groups. Despite its relatively high burden, representation of individuals of African ancestry in asthma genome-wide association studies (GWAS) has been inadequate, and true associations in these underrepresented minority groups have been inconclusive. We report the results of a genome-wide meta-analysis from the Consortium on Asthma among African Ancestry Populations (CAAPA; 7009 asthma cases, 7645 controls). We find strong evidence for association at four previously reported asthma loci whose discovery was driven largely by non-African populations, including the chromosome 17q12-q21 locus and the chr12q13 region, a novel (and not previously replicated) asthma locus recently identified by the Trans-National Asthma Genetic Consortium (TAGC). An additional seven loci reported by TAGC show marginal evidence for association in CAAPA. We also identify two novel loci (8p23 and 8q24) that may be specific to asthma risk in African ancestry populations.
Keyphrases
- chronic obstructive pulmonary disease
- lung function
- genome wide
- allergic rhinitis
- genome wide association study
- genome wide association
- systematic review
- dna methylation
- cystic fibrosis
- small molecule
- randomized controlled trial
- gene expression
- air pollution
- risk factors
- meta analyses
- quality improvement
- case control