Arginine-Modified Hemin Enhances G-Quadruplex DNAzyme Peroxidase Activity for High Sensitivity Detection.
Bin LiuTian WangDehui QiuXinrong YanYuan LiuJean-Louis MergnyXiaobo ZhangDavid MonchaudHuangxian JuJun ZhouPublished in: Analytical chemistry (2024)
Hemin/G-quadruplex (hG4) complexes are frequently used as artificial peroxidase-like enzymatic systems (termed G4 DNAzymes) in many biosensing applications, in spite of a rather low efficiency, notably in terms of detection limits. To tackle this issue, we report herein a strategy in which hemin is chemically modified with the amino acids found in the active site of parent horseradish peroxidase (HRP), with the aim of recreating an environment conducive to high catalytic activity. When hemin is conjugated with a single arginine, it associates with G4 to create an arginine-hemin/G4 (R-hG4) DNAzyme that exhibits improved catalytic performances, characterized by kinetic analysis and DFT calculations. The practical relevance of this system was demonstrated with the implementation of biosensing assays enabling the chemiluminescent detection of G4-containing DNA and colorimetry detection of the flap endonuclease 1 (FEN1) enzyme with a high efficiency and sensitivity. Our results thus provide a guide for future enzyme engineering campaigns to create ever more efficient peroxidase-mimicking DNA-based systems.
Keyphrases
- label free
- hydrogen peroxide
- nitric oxide
- loop mediated isothermal amplification
- amino acid
- real time pcr
- high efficiency
- living cells
- healthcare
- primary care
- single molecule
- circulating tumor
- fluorescent probe
- cell free
- high throughput
- molecular dynamics
- oxidative stress
- dna repair
- dna damage
- molecular docking
- current status