Proximity mapping of the microtubule plus-end tracking protein SLAIN2 using the BioID approach.
Elif Nur Firat KaralarPublished in: Turkish journal of biology = Turk biyoloji dergisi (2020)
The centrosome is the main microtubule-organizing center of animal cells, which plays key roles in critical cellular processes ranging from cell division to cellular signaling. Accordingly, defects in the structure and function of centrosomes cause various human diseases such as cancer and primary microcephaly. To elucidate the molecular defects underlying these diseases, the biogenesis and functions of the centrosomes have to be fully understood. An essential step towards addressing these questions is the identification and functional dissection of the full repertoire of centrosome proteins. Here, we used high-resolution imaging and showed that the microtubule plus-end tracking protein SLAIN2 localizes to the pericentriolar material at the proximal end of centrioles. To gain insight into its cellular functions and mechanisms, we applied in vivo proximity-dependent biotin identification to SLAIN2 and generated its proximity interaction map. Gene ontology analysis of the SLAIN2 interactome revealed extensive interactions with centriole duplication, ciliogenesis, and microtubule-associated proteins, including previously characterized and uncharacterized interactions. Collectively, our results define SLAIN2 as a component of pericentriolar material and provide an important resource for future studies aimed at elucidating SLAIN2 functions at the centrosome.
Keyphrases
- high resolution
- single cell
- induced apoptosis
- zika virus
- mass spectrometry
- protein protein
- intellectual disability
- papillary thyroid
- amino acid
- squamous cell carcinoma
- bioinformatics analysis
- genome wide
- cell cycle arrest
- high speed
- binding protein
- high density
- bone marrow
- current status
- dna methylation
- autism spectrum disorder
- cell proliferation
- small molecule
- squamous cell
- endoplasmic reticulum stress
- signaling pathway
- liquid chromatography
- pluripotent stem cells