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Overall Shape Constraint of Alternating α/β-Hybrid Peptides Containing Bicyclic β-Proline.

Siyuan WangYuko OtaniLuhan ZhaiAoze SuMasayuki NaraMasatoshi KawahataKentaro YamaguchiAkane SadaRieko OhkiTomohiko Ohwada
Published in: Organic letters (2019)
Our NMR, IR/Raman, CD spectroscopic, and X-ray crystallographic studies, as well as accelerated molecular dynamics simulations, showed that alternating hybrid α/β-peptides containing a bicyclic β-proline surrogate form unique extended curved folds, regardless of the peptide length and solvent environment. It is suggested that extended β/PPII structures are preferred in the insulating α-alanine moieties between the rigid bicyclic β-proline structures. These hybrid peptides inhibit p53-MDM2 and p53-MDMX protein-protein interactions.
Keyphrases
  • molecular dynamics simulations
  • high resolution
  • molecular docking
  • amino acid
  • magnetic resonance
  • magnetic resonance imaging
  • computed tomography
  • mass spectrometry