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Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources.

Ginger TsuengJulia L MullenManar AlkuzwenyMarco CanoBenjamin RushEmily HaagJason LinDylan J WelzelXinghua ZhouZhongchao QianAlaa Abdel LatifEmory HufbauerMark ZellerKristian G AndersenChunlei WuAndrew I SuKarthik GangavarapuLaura D Hughes
Published in: Nature methods (2023)
Outbreak.info Research Library is a standardized, searchable interface of coronavirus disease 2019 (COVID-19) and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) publications, clinical trials, datasets, protocols and other resources, built with a reusable framework. We developed a rigorous schema to enforce consistency across different sources and resource types and linked related resources. Researchers can quickly search the latest research across data repositories, regardless of resource type or repository location, via a search interface, public application programming interface (API) and R package.
Keyphrases
  • respiratory syndrome coronavirus
  • coronavirus disease
  • sars cov
  • clinical trial
  • healthcare
  • high throughput
  • emergency department
  • rna seq
  • randomized controlled trial
  • machine learning
  • open label
  • study protocol