ANDA: An open-source tool for automated image analysis of neuronal differentiation.

Hallvard Austin WæhlerNils-Anders LabbaRagnhild Elisabeth PaulsenGeir Kjetil F Sandve Ragnhild Eskeland

Published in: bioRxiv : the preprint server for biology (2023)

ANDA is an open-source tool that is easy to use and capable of automated processing from time-course measurements of neuronal cells. The strength of this pipeline is the capability to analyse high-throughput imaging screens.

Keyphrases

high throughput
deep learning
induced apoptosis
single cell
cell cycle arrest
high resolution
cerebral ischemia
machine learning
oxidative stress
cell death
endoplasmic reticulum stress
genome wide
signaling pathway
subarachnoid hemorrhage
gene expression
photodynamic therapy
brain injury