Geir Kjetil F Sandve (Geir Kjetil Sandve, Geir K Sandve)

Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 28

Top Topics

Dna Methylation

Machine Learning

Top Venues

Nature computational science

Science advances

Translational psychiatry

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Mai Ha Vu, Philippe A Robert, Rahmad Akbar, Bartlomiej Swiatczak, Geir Kjetil F Sandve, Dag Trygve Truslew Haug, Victor Greiff
Linguistics-based formalization of the antibody language as a basis for antibody language models. Nature computational science 4 (6) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Mai Ha Vu, Philippe A Robert, Rahmad Akbar, Bartlomiej Swiatczak, Geir Kjetil F Sandve, Dag Trygve Truslew Haug, Victor Greiff
Linguistics-based formalization of the antibody language as a basis for antibody language models. Nature computational science (2024)
Hallvard Austin Wæhler, Nils-Anders Labba, Ragnhild Elisabeth Paulsen, Geir Kjetil F Sandve, Ragnhild Eskeland
ANDA: An open-source tool for automated image analysis of neuronal differentiation. bioRxiv : the preprint server for biology (2023)
Markéta Chlubnová, Asbjørn O Christophersen, Geir Kjetil F Sandve, Prof Knut E A Lundin, Prof Jørgen Jahnsen, Shiva Dahal-Koirala, Ludvig M Sollid
Identification of gluten T cell epitopes driving celiac disease. Science advances 9 (4) (2023)
Emilie Willoch Olstad, Hedvig Marie Egeland Nordeng, Geir Kjetil F Sandve, Robert Lyle, Kristina Gervin
Effects of prenatal exposure to (es)citalopram and maternal depression during pregnancy on DNA methylation and child neurodevelopment. Translational psychiatry 13 (1) (2023)
Hallvard Austin Wæhler, Nils-Anders Labba, Ragnhild Elisabeth Paulsen, Geir Kjetil F Sandve, Ragnhild Eskeland
ANDA: An open-source tool for automated image analysis of neuronal differentiation. bioRxiv : the preprint server for biology (2023)
Markéta Chlubnová, Asbjørn O Christophersen, Geir Kjetil F Sandve, Prof Knut E A Lundin, Prof Jørgen Jahnsen, Shiva Dahal-Koirala, Ludvig M Sollid
Identification of gluten T cell epitopes driving celiac disease. Science advances 9 (4) (2023)
Emilie Willoch Olstad, Hedvig Marie Egeland Nordeng, Geir Kjetil F Sandve, Robert Lyle, Kristina Gervin
Effects of prenatal exposure to (es)citalopram and maternal depression during pregnancy on DNA methylation and child neurodevelopment. Translational psychiatry 13 (1) (2023)
Emilie Willoch Olstad, Hedvig Marie Egeland Nordeng, Geir Kjetil F Sandve, Robert Lyle, Kristina Gervin
Effects of prenatal exposure to (es)citalopram and maternal depression during pregnancy on DNA methylation and child neurodevelopment. Translational psychiatry 13 (1) (2023)
Emilie Willoch Olstad, Hedvig Marie Egeland Nordeng, Geir Kjetil F Sandve, Robert Lyle, Kristina Gervin
Effects of prenatal exposure to (es)citalopram and maternal depression during pregnancy on DNA methylation and child neurodevelopment. Translational psychiatry 13 (1) (2023)
Hallvard Austin Wæhler, Nils-Anders Labba, Ragnhild Elisabeth Paulsen, Geir Kjetil F Sandve, Ragnhild Eskeland
ANDA: An open-source tool for automated image analysis of neuronal differentiation. bioRxiv : the preprint server for biology (2023)
Chakravarthi Kanduri, Lonneke Scheffer, Milena Pavlović, Knut Dagestad Rand, Maria Chernigovskaya, Oz Pirvandy, Gur Yaari, Victor Greiff, Geir Kjetil F Sandve
simAIRR: simulation of adaptive immune repertoires with realistic receptor sequence sharing for benchmarking of immune state prediction methods. GigaScience 12 (2023)
Markéta Chlubnová, Asbjørn O Christophersen, Geir Kjetil F Sandve, Prof Knut E A Lundin, Prof Jørgen Jahnsen, Shiva Dahal-Koirala, Ludvig M Sollid
Identification of gluten T cell epitopes driving celiac disease. Science advances 9 (4) (2023)
Markéta Chlubnová, Asbjørn O Christophersen, Geir Kjetil F Sandve, Prof Knut E A Lundin, Prof Jørgen Jahnsen, Shiva Dahal-Koirala, Ludvig M Sollid
Identification of gluten T cell epitopes driving celiac disease. Science advances 9 (4) (2023)
Chakravarthi Kanduri, Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Maria Chernigovskaya, Victor Greiff, Geir Kjetil F Sandve
Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification. GigaScience 11 (2022)
Torbjørn Rognes, Lonneke Scheffer, Victor Greiff, Geir Kjetil F Sandve
CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching. Bioinformatics (Oxford, England) 38 (17) (2022)
Rahmad Akbar, Philippe A Robert, Cédric R Weber, Michael Widrich, Robert Frank, Milena Pavlović, Lonneke Scheffer, Maria Chernigovskaya, Igor Snapkov, Andrei Slabodkin, Brij Bhushan Mehta, Enkelejda Miho, Fridtjof Lund-Johansen, Jan Terje Andersen, Sepp Hochreiter, Ingrid Hobæk Haff, Guenter Klambauer, Geir Kjetil F Sandve, Victor Greiff
In silico proof of principle of machine learning-based antibody design at unconstrained scale. mAbs 14 (1) (2022)
Geir Kjetil F Sandve, Victor Greiff
Access to ground truth at unconstrained size makes simulated data as indispensable as experimental data for bioinformatics methods development and benchmarking. Bioinformatics (Oxford, England) 38 (21) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Andrei Slabodkin, Maria Chernigovskaya, Ivana Mikocziova, Rahmad Akbar, Lonneke Scheffer, Milena Pavlović, Habib Bashour, Igor Snapkov, Brij Bhushan Mehta, Cédric R Weber, José Gutiérrez Marcos, Ludvig M Sollid, Ingrid Hobæk Haff, Geir Kjetil F Sandve, Philippe A Robert, Victor Greiff
Individualized VDJ recombination predisposes the available Ig sequence space. Genome research (2021)
Gabriel Balaban, Ivar Grytten, Knut Dagestad Rand, Lonneke Scheffer, Geir Kjetil F Sandve
Ten simple rules for quick and dirty scientific programming. PLoS computational biology 17 (3) (2021)
Bishnudeo Roy, Ralf S Neumann, Omri Snir, Rasmus Iversen, Geir Kjetil F Sandve, Knut E A Lundin, Ludvig M Sollid
High-Throughput Single-Cell Analysis of B Cell Receptor Usage among Autoantigen-Specific Plasma Cells in Celiac Disease. Journal of immunology (Baltimore, Md. : 1950) 199 (2) (2017)
Chakravarthi Kanduri, Diana Domanska, Eivind Hovig, Geir Kjetil F Sandve
Genome build information is an essential part of genomic track files. Genome biology 18 (1) (2017)
Sam D Molyneux, Paul D Waterhouse, Dawne Shelton, Yang W Shao, Christopher M Watling, Qing-Lian Tang, Isaac S Harris, Brendan C Dickson, Pirashaanthy Tharmapalan, Geir Kjetil F Sandve, Xiaoyang Zhang, Swneke D Bailey, Hal Berman, Jay S Wunder, Zsuzsanna Izsvák, Zsuzsanna Iszvak, Mathieu Lupien, Tak W Mak, Rama Khokha
Human somatic cell mutagenesis creates genetically tractable sarcomas. Nature genetics 46 (9) (2014)