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Panacibacter microcysteis sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period.

Ve Van LeSo-Ra KoMingyeong KangSang-Ah LeeHee-Mock OhChi-Yong Ahn
Published in: Archives of microbiology (2022)
A Gram-stain-negative, rod-shaped bacterial strain DH6 T was isolated from fresh water of the Daechung Reservoir during the Microcystis bloom period. The strain grew at pH 6.0-8.5, at temperature 17-40 °C, and at 0-1% (w/v) NaCl concentration. Comparison of 16S rRNA gene sequence indicated that strain DH6 T exhibits the highest similarity with Panacibacter ginsenosidivorans Gsoil 1550 T (96.6%). The average nucleotide identity (ANI), digital DNA-DNA hybridization (dDDH), and average amino acid identity (AAI) values of strain DH6 T compared to its related type strains were below 74.2%, 22.3%, and 74.8%, respectively. The predominant fatty acids (> 5.0%) were identified as iso-C 17:0 3-OH, iso-C 13:0 , iso-C 15:0 , C 17:0 2-OH, iso-C 11:0 , anteiso-C 13:0 , and iso-C 15:1 G. The polar lipid profile contained phosphatidylethanolamine, four unidentified aminolipids, and three unidentified lipids. The respiratory quinone was menaquinone 7 (MK-7). The genomic DNA G + C content was 42.6%. Collectively, strain DH6 T should be classified as a novel species within the genus Panacibacter, for which the name Panacibacter microcysteis sp. nov. is proposed. The type strain is DH6 T (= KCTC 82471 T  = LMG 32426 T ).
Keyphrases
  • single molecule
  • circulating tumor
  • fatty acid
  • amino acid
  • cell free
  • escherichia coli
  • copy number
  • gram negative
  • ionic liquid
  • genome wide analysis