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Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov., Isolated from Freshwater and Soil.

Yong-Seok KimEun-Mi HwangChang-Myeong JeongChang-Jun Cha
Published in: Journal of microbiology (Seoul, Korea) (2023)
Two novel bacterial strains CJ74 T and CJ75 T belonging to the genus Flavobacterium were isolated from freshwater of Han River and ginseng soil, South Korea, respectively. Strain CJ74 T was Gram-stain-negative, aerobic, rod-shaped, non-motile, and non-flagellated, and did not produce flexirubin-type pigments. Strain CJ75 T was Gram-stain-negative, aerobic, rod-shaped, motile by gliding, and non-flagellated, and produced flexirubin-type pigments. Both strains were shown to grow optimally at 30 °C in the absence of NaCl on R2A medium. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains CJ74 T and CJ75 T belonged to the genus Flavobacterium and were most closely related to Flavobacterium niveum TAPW14 T and Flavobacterium foetidum CJ42 T with 96.17% and 97.29% 16S rRNA sequence similarities, respectively. Genomic analyses including the reconstruction of phylogenomic tree, average nucleotide identity, and digital DNA-DNA hybridization suggested that they were novel species of the genus Flavobacterium. Both strains contained menaquinone 6 (MK-6) as the primary respiratory quinone and phosphatidylethanolamine as a major polar lipid. The predominant fatty acids of both strains were iso-C 15:0 and summed feature 3 (C 16:1 ω7c and/or C 16:1 ω6c). Based on the polyphasic taxonomic study, strains CJ74 T and CJ75 T represent novel species of the genus Flavobacterium, for which names Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov. are proposed, respectively. The type strains are CJ74 T (=KACC 19819 T  =JCM 32889 T ) and CJ75 T (=KACC 23149 T  =JCM 36132 T ).
Keyphrases
  • escherichia coli
  • fatty acid
  • single molecule
  • gene expression
  • high intensity
  • cell free
  • copy number
  • circulating tumor
  • gram negative
  • ionic liquid
  • amino acid
  • multidrug resistant
  • circulating tumor cells
  • neural network