Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.
Chuyi ChenYuyang GuJulien PhilippePeiran ZhangHunter BachmanJinxin ZhangJohn MaiJoseph RufoJohn F RawlsErica E DavisNicholas KatsanisTony Jun HuangPublished in: Nature communications (2021)
Modern biomedical research and preclinical pharmaceutical development rely heavily on the phenotyping of small vertebrate models for various diseases prior to human testing. In this article, we demonstrate an acoustofluidic rotational tweezing platform that enables contactless, high-speed, 3D multispectral imaging and digital reconstruction of zebrafish larvae for quantitative phenotypic analysis. The acoustic-induced polarized vortex streaming achieves contactless and rapid (~1 s/rotation) rotation of zebrafish larvae. This enables multispectral imaging of the zebrafish body and internal organs from different viewing perspectives. Moreover, we develop a 3D reconstruction pipeline that yields accurate 3D models based on the multi-view images for quantitative evaluation of basic morphological characteristics and advanced combinations of metrics. With its contactless nature and advantages in speed and automation, our acoustofluidic rotational tweezing system has the potential to be a valuable asset in numerous fields, especially for developmental biology, small molecule screening in biochemistry, and pre-clinical drug development in pharmacology.
Keyphrases
- high speed
- high resolution
- capillary electrophoresis
- atomic force microscopy
- small molecule
- mass spectrometry
- high throughput
- fluorescence imaging
- aedes aegypti
- endothelial cells
- drosophila melanogaster
- high glucose
- deep learning
- mesenchymal stem cells
- convolutional neural network
- zika virus
- climate change
- cell therapy
- stem cells
- diabetic rats
- protein protein
- oxidative stress
- drug induced
- bone marrow
- risk assessment
- pluripotent stem cells
- loop mediated isothermal amplification