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A systematic survey of centrality measures for protein-protein interaction networks.

Minoo AshtianiAli Salehzadeh-YazdiZahra Razaghi-MoghadamHolger HennigOlaf WolkenhauerMehdi MirzaieMohieddin Jafari
Published in: BMC systems biology (2018)
The choice of a suitable set of centrality measures is crucial for inferring important functional properties of a network. We concluded that undertaking data reduction using unsupervised machine learning methods helps to choose appropriate variables (centrality measures). Hence, we proposed identifying the contribution proportions of the centrality measures with PCA as a prerequisite step of network analysis before inferring functional consequences, e.g., essentiality of a node.
Keyphrases
  • machine learning
  • network analysis
  • protein protein
  • small molecule
  • big data
  • lymph node
  • cross sectional