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CRISPR-Cas-Docker: web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins.

Ho-Min ParkJongbum WonYunseol ParkEsla Timothy AnzakuJoris VankerschaverArnout Van MessemWesley De NeveHyunjin Shim
Published in: BMC bioinformatics (2023)
CRISPR-Cas-Docker addresses the need of the CRISPR-Cas community to predict RNA-protein interactions in silico by optimizing multiple stages of computation and evaluation, specifically for CRISPR-Cas systems. CRISPR-Cas-Docker is available at www.crisprcasdocker.org as a web server, and at https://github.com/hshimlab/CRISPR-Cas-Docker as an open-source tool.
Keyphrases
  • crispr cas
  • genome editing
  • machine learning
  • molecular docking
  • mental health
  • molecular dynamics simulations
  • protein protein
  • binding protein
  • amino acid