GTSE1, CDC20, PCNA, and MCM6 Synergistically Affect Regulations in Cell Cycle and Indicate Poor Prognosis in Liver Cancer.
Yong-Chang ZhengYue ShiSi YuYuanyuan HanKai KangHaifeng XuHuajian GuXinting SangYang ChenJingyu WangPublished in: Analytical cellular pathology (Amsterdam) (2019)
GTSE1 is well correlated with tumor progression; however, little is known regarding its role in liver cancer prognosis. By analyzing the hepatocellular carcinoma (HCC) datasets in GEO and TCGA databases, we showed that high expression of GTSE1 was correlated with advanced pathologic stage and poor prognosis of HCC patients. To investigate underlying molecular mechanism, we generated GTSE1 knockdown HCC cell line and explored the effects of GTSE1 deficiency in cell growth. Between GTSE1 knockdown and wild-type HCC cells, we identified 979 differentially expressed genes (520 downregulated and 459 upregulated genes) in the analysis of microarray-based gene expression profiling. Functional enrichment analysis of DEGs suggested that S phase was dysregulated without GTSE1 expression, which was further verified from flow cytometry analysis. Moreover, three other DEGs: CDC20, PCNA, and MCM6, were also found contributing to GTSE1-related cell cycle arrest and to be associated with poor overall survival of HCC patients. In conclusion, GTSE1, together with CDC20, PCNA, and MCM6, may synergistically promote adverse prognosis in HCC by activating cell cycle. Genes like GTSE1, CDC20, PCNA, and MCM6 may be promising prognostic molecular biomarkers in liver cancer.
Keyphrases
- poor prognosis
- cell cycle
- long non coding rna
- cell proliferation
- cell cycle arrest
- genome wide
- end stage renal disease
- ejection fraction
- newly diagnosed
- genome wide identification
- flow cytometry
- chronic kidney disease
- cell death
- emergency department
- dna methylation
- gene expression
- bioinformatics analysis
- machine learning
- oxidative stress
- pi k akt
- radiation therapy
- copy number
- single molecule
- artificial intelligence
- single cell
- patient reported
- smoking cessation
- data analysis
- replacement therapy