Circadian regulation of the Drosophila astrocyte transcriptome.
Samantha YouAlder M YuMary A RobertsIvanna J JosephF Rob JacksonPublished in: PLoS genetics (2021)
Recent studies have demonstrated that astrocytes cooperate with neurons of the brain to mediate circadian control of many rhythmic processes including locomotor activity and sleep. Transcriptional profiling studies have described the overall rhythmic landscape of the brain, but few have employed approaches that reveal heterogeneous, cell-type specific rhythms of the brain. Using cell-specific isolation of ribosome-bound RNAs in Drosophila, we constructed the first circadian "translatome" for astrocytes. This analysis identified 293 "cycling genes" in astrocytes, most with mammalian orthologs. A subsequent behavioral genetic screen identified a number of genes whose expression is required in astrocytes for normal sleep behavior. In particular, we show that certain genes known to regulate fly innate immune responses are also required for normal sleep patterns.
Keyphrases
- genome wide
- single cell
- immune response
- resting state
- white matter
- dna methylation
- sleep quality
- physical activity
- rna seq
- functional connectivity
- gene expression
- high throughput
- bioinformatics analysis
- poor prognosis
- genome wide identification
- spinal cord injury
- spinal cord
- copy number
- cerebral ischemia
- transcription factor
- depressive symptoms
- case control
- mesenchymal stem cells
- bone marrow
- cell therapy
- oxidative stress