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High dimensional model representation of log-likelihood ratio: binary classification with expression data.

Ali Foroughi PourMaciej PietrzakLori A DaltonGrzegorz A Rempała
Published in: BMC bioinformatics (2020)
The proposed HDMR-based approach appears to produce a reliable classifier that additionally allows one to describe how individual genes or gene-gene interactions affect classification decisions. Both real and synthetic data analyses suggest that our methods can be used to identify gene networks with dysregulated pairwise interactions, and are therefore appropriate for differential networks analysis.
Keyphrases
  • genome wide
  • genome wide identification
  • copy number
  • machine learning
  • deep learning
  • poor prognosis
  • big data
  • dna methylation
  • transcription factor
  • artificial intelligence