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Pipeline for transferring annotations between proteins beyond globular domains.

Elizabeth Martínez-PérezMátyás PajkosSilvio C E TosattoToby J GibsonZsuzsanna DosztanyiCristina Marino-Buslje
Published in: Protein science : a publication of the Protein Society (2023)
We have designed a pipeline to obtain good quality MSAs and to transfer annotations from any protein to their orthologs. Applying the pipeline to DisProt proteins, from the 1,731 entries with 5,623 annotations we can reach 97,555 orthologs and transfer a total of 301,190 terms by homology. We also provide a web server for consulting the results of DisProt proteins and execute the pipeline for any other protein. The server Homology Transfer IDP (HoTIDP) is accessible at http://hotidp.leloir.org.ar. This article is protected by copyright. All rights reserved.
Keyphrases
  • protein protein
  • small molecule
  • amino acid
  • binding protein
  • electron transfer