Silvio C E Tosatto (Silvio Tosatto, Alessio Del Conte)

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 72

Top Venues

Nucleic acids research

Science advances

Human mutation

Journal of proteome research

Università degli Studi di Padova

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Università degli Studi di Padova Oct 01 2016

Italy

Full Professor :: Department of Biomedical Sciences

Università degli Studi di Padova Sep 01 2007 - Sep 30 2016

Italy

Associate Professor :: Department of Biomedical Sciences

Publications

Damiano Piovesan, Davide Zago, Parnal Joshi, M Clara De Paolis Kaluza, Mahta Mehdiabadi, Rashika Ramola, Alexander Miguel Monzon, Walter Reade, Iddo Friedberg, Predrag Radivojac, Silvio C E Tosatto
CAFA-evaluator: a Python tool for benchmarking ontological classification methods. Bioinformatics advances 4 (1) (2024)
Alessio Del Conte, Giorgia F Camagni, Damiano Clementel, Giovanni Minervini, Alexander Miguel Monzon, Carlo Ferrari, Damiano Piovesan, Silvio C E Tosatto
RING 4.0: faster residue interaction networks with novel interaction types across over 35,000 different chemical structures. Nucleic acids research 52 (W1) (2024)
Damiano Piovesan, Davide Zago, Parnal Joshi, M Clara De Paolis Kaluza, Mahta Mehdiabadi, Rashika Ramola, Alexander Miguel Monzon, Walter Reade, Iddo Friedberg, Predrag Radivojac, Silvio C E Tosatto
CAFA-evaluator: a Python tool for benchmarking ontological classification methods. Bioinformatics advances 4 (1) (2024)
Alessio Del Conte, Giorgia F Camagni, Damiano Clementel, Giovanni Minervini, Alexander Miguel Monzon, Carlo Ferrari, Damiano Piovesan, Silvio C E Tosatto
RING 4.0: faster residue interaction networks with novel interaction types across over 35,000 different chemical structures. Nucleic acids research 52 (W1) (2024)
Alessio Del Conte, Giorgia F Camagni, Damiano Clementel, Giovanni Minervini, Alexander Miguel Monzon, Carlo Ferrari, Damiano Piovesan, Silvio C E Tosatto
RING 4.0: faster residue interaction networks with novel interaction types across over 35,000 different chemical structures. Nucleic acids research (2024)
Massimo Bellanda, Milena Damulewicz, Barbara Zambelli, Elisa Costanzi, Francesco Gregoris, Stefano Mammi, Silvio C E Tosatto, Rodolfo Costa, Giovanni Minervini, Gabriella M Mazzotta
A PDZ scaffolding/CaM-mediated pathway in Cryptochrome signaling. Protein science : a publication of the Protein Society 33 (3) (2024)
Federica Quaglia, Anastasia Chasapi, Maria Victoria Nugnes, Maria Cristina Aspromonte, Emanuela Leonardi, Damiano Piovesan, Silvio C E Tosatto
Best practices for the manual curation of intrinsically disordered proteins in DisProt. Database : the journal of biological databases and curation 2024 (2024)
Massimo Bellanda, Milena Damulewicz, Barbara Zambelli, Elisa Costanzi, Francesco Gregoris, Stefano Mammi, Silvio C E Tosatto, Rodolfo Costa, Giovanni Minervini, Gabriella M Mazzotta
A PDZ scaffolding/CaM-mediated pathway in Cryptochrome signaling. Protein science : a publication of the Protein Society 33 (3) (2024)
Federica Quaglia, Anastasia Chasapi, Maria Victoria Nugnes, Maria Cristina Aspromonte, Emanuela Leonardi, Damiano Piovesan, Silvio C E Tosatto
Best practices for the manual curation of intrinsically disordered proteins in DisProt. Database : the journal of biological databases and curation 2024 (2024)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research 22 (2) (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research (2023)
Silvio C E Tosatto, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, null null, Silvio C E Tosatto, Damiano Piovesan
CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins. Nucleic acids research (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Elizabeth Martínez-Pérez, Mátyás Pajkos, Silvio C E Tosatto, Toby J Gibson, Zsuzsanna Dosztanyi, Cristina Marino-Buslje
Pipeline for transferring annotations between proteins beyond globular domains. Protein science : a publication of the Protein Society (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research 22 (2) (2023)
Giorgia F Camagni, Giovanni Minervini, Silvio C E Tosatto
Structural Characterization of Hypoxia Inducible Factor α-Prolyl Hydroxylase Domain 2 Interaction through MD Simulations. International journal of molecular sciences 24 (5) (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research 22 (2) (2023)
Alessio Del Conte, Alexander Miguel Monzon, Damiano Clementel, Giorgia F Camagni, Giovanni Minervini, Silvio C E Tosatto, Damiano Piovesan
RING-PyMOL: residue interaction networks of structural ensembles and molecular dynamics. Bioinformatics (Oxford, England) 39 (5) (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Andras Hatos, João Mc Teixeira, Susana Barrera-Vilarmau, Attila Horvath, Silvio C E Tosatto, Christopher M Dobson, Monika Fuxreiter
FuzPred: a web server for the sequence-based prediction of the context-dependent binding modes of proteins. Nucleic acids research (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Maria Cristina Aspromonte, María Victoria Nugnes, Federica Quaglia, Adel Bouharoua, null null, Silvio C E Tosatto, Damiano Piovesan
DisProt in 2024: improving function annotation of intrinsically disordered proteins. Nucleic acids research (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Giorgia F Camagni, Giovanni Minervini, Silvio C E Tosatto
Structural Characterization of Hypoxia Inducible Factor α-Prolyl Hydroxylase Domain 2 Interaction through MD Simulations. International journal of molecular sciences 24 (5) (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research 22 (2) (2023)
Bálint Mészáros, Andras Hatos, Nicolas Palopoli, Federica Quaglia, Edoardo Salladini, Kim Van Roey, Haribabu Arthanari, Zsuzsanna Dosztányi, Isabella C Felli, Patrick D Fischer, Jeffrey C Hoch, Cy Michael Jeffries, Sonia Longhi, Emiliano Maiani, Sandra E Orchard, Rita Pancsa, Elena Papaleo, Roberta Pierattelli, Damiano Piovesan, Iva Pritisanac, Luiggi Tenorio, Thibault Viennet, Peter Tompa, Wim F Vranken, Silvio C E Tosatto, Norman E Davey
Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions. Nature methods (2023)
Giorgia F Camagni, Giovanni Minervini, Silvio C E Tosatto
Structural Characterization of Hypoxia Inducible Factor α-Prolyl Hydroxylase Domain 2 Interaction through MD Simulations. International journal of molecular sciences 24 (5) (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Alessio Del Conte, Alexander Miguel Monzon, Damiano Clementel, Giorgia F Camagni, Giovanni Minervini, Silvio C E Tosatto, Damiano Piovesan
RING-PyMOL: residue interaction networks of structural ensembles and molecular dynamics. Bioinformatics (Oxford, England) 39 (5) (2023)
Eric W Deutsch, Juan Antonio Vizcaino, Andrew R Jones, Pierre-Alain Binz, Henry H N Lam, Joshua Klein, Wout Bittremieux, Yasset Perez Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin-Ichiro Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy J Carver, Benjamin S Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio C E Tosatto, Sandra E Orchard
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work. Journal of proteome research 22 (2) (2023)
Hamidreza Ghafouri, Tamas Lazar, Alessio Del Conte, Luiggi G Tenorio Ku, null null, Peter Tompa, Silvio C E Tosatto, Alexander Miguel Monzon
PED in 2024: improving the community deposition of structural ensembles for intrinsically disordered proteins. Nucleic acids research (2023)
Diana Piol, Laura Tosatto, Emanuela Zuccaro, Eric N Anderson, Antonella Falconieri, Maria J Polanco, Caterina Marchioretti, Federica Lia, Joseph White, Elisa Bregolin, Giovanni Minervini, Sara Parodi, Xavier Salvatella, Giorgio Arrigoni, Andrea Balabio, Albert R La Spada, Silvio C E Tosatto, Fabio Sambataro, Diego Luis Medina, Udai Bhan Pandey, Manuela Bassoi, Maria Pennuto
Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function. Science advances 9 (1) (2023)
Andras Hatos, Silvio C E Tosatto, Christopher M Dobson, Monika Fuxreiter
FuzDrop on AlphaFold: visualizing the sequence-dependent propensity of liquid-liquid phase separation and aggregation of proteins. Nucleic acids research (2022)
Typhaine Paysan-Lafosse, Matthias Blum, Sara Rocío Chuguransky, Tiago Grego, Beatriz Lázaro Pinto, Gustavo A Salazar, Maxwell L Bileschi, Peer Bork, Alan J Bridge, Lucy J Colwell, Julian Gough, Daniel H Haft, Ivica Letunic, Aron Marchler-Bauer, Huaiyu Mi, Darren A Natale, Christine A Orengo, Arun Prasad Pandurangan, Catherine Rivoire, Christian J A Sigrist, Ian Sillitoe, Narmada Thanki, Paul D Thomas, Silvio C E Tosatto, Cathy H Wu, Alex Bateman
InterPro in 2022. Nucleic acids research (2022)
Antonella Falconieri, Giovanni Minervini, Federica Quaglia, Geppo Sartori, Silvio C E Tosatto
Characterization of the pVHL Interactome in Human Testis Using High-Throughput Library Screening. Cancers 14 (4) (2022)
Damiano Piovesan, Alessio Del Conte, Damiano Clementel, Alexander Miguel Monzon, Martina Bevilacqua, Maria Cristina Aspromonte, Javier A Iserte, Fernando E Orti, Cristina Marino-Buslje, Silvio C E Tosatto
MobiDB: 10 years of intrinsically disordered proteins. Nucleic acids research (2022)
Mihaly Varadi, Sreenath Nair, Ian Sillitoe, Gerardo Tauriello, Stephen Anyango, Stefan Bienert, Clemente Borges, Mandar S Deshpande, Tim Green, Demis Hassabis, Andras Hatos, Tamás Hegedűs, Maarten L Hekkelman, Robbie P Joosten, John M Jumper, Agata Laydon, Dmitry S Molodenskiy, Damiano Piovesan, Edoardo Salladini, Steven L Salzberg, Markus J Sommer, Martin Steinegger, Erzsebet Suhajda, Dmitri I Svergun, Luiggi Tenorio-Ku, Silvio C E Tosatto, Kathryn Tunyasuvunakool, Andrew Mark Waterhouse, Augustin Žídek, Torsten Schwede, Christine A Orengo, Sameer Velankar
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources. GigaScience 11 (2022)
Damiano Clementel, Alessio Del Conte, Alexander Miguel Monzon, Giorgia F Camagni, Giovanni Minervini, Damiano Piovesan, Silvio C E Tosatto
RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles. Nucleic acids research (2022)
Damiano Piovesan, Alexander Miguel Monzon, Silvio C E Tosatto
Intrinsic protein disorder and conditional folding in AlphaFoldDB. Protein science : a publication of the Protein Society 31 (11) (2022)
Franco Pradelli, Giovanni Minervini, Silvio C E Tosatto
Mocafe: a comprehensive Python library for simulating cancer development with Phase Field Models. Bioinformatics (Oxford, England) 38 (18) (2022)
Suvarna Nadendla, Rebecca C Jackson, James B Munro, Federica Quaglia, Bálint Mészáros, Dustin Olley, Elizabeth T Hobbs, Stephen M Goralski, Marcus C Chibucos, Christopher John Mungall, Silvio C E Tosatto, Ivan Erill, Michelle G Giglio
ECO: the Evidence and Conclusion Ontology, an update for 2022. Nucleic acids research 50 (D1) (2022)
Marco Necci, Damiano Piovesan, null null, null null, Silvio C E Tosatto
Critical assessment of protein intrinsic disorder prediction. Nature methods 18 (5) (2021)
Ian Walsh, Dmytro Fishman, Dario García-Gasulla, Tiina Titma, Gianluca Pollastri, null null, Jennifer Harrow, Fotis E Psomopoulos, Silvio C E Tosatto
DOME: recommendations for supervised machine learning validation in biology. Nature methods 18 (10) (2021)
Andras Hatos, Alexander Miguel Monzon, Silvio C E Tosatto, Damiano Piovesan, Monika Fuxreiter
FuzDB: a new phase in understanding fuzzy interactions. Nucleic acids research (2021)
Federica Quaglia, Bálint Mészáros, Edoardo Salladini, Andras Hatos, Rita Pancsa, Lucía Beatriz Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E Davey, Radoslav Davidović, László Dobson, Arne Elofsson, Gábor Erdős, Pascale Gaudet, Michelle G Giglio, Juliana Glavina, Javier Iserte, Valentin Iglesias, Zsófia Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino-Buslje, Attila Mészáros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F Nilsson, Marian Novotný, Christos A Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro José Barbosa Pereira, Gabriele Pozzati, Vasilis J Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Eva Schad, Aditi Shenoy, Tamás Szaniszló, Konstantinos D Tsirigos, Nevena Veljkovic, Gustavo Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C E Tosatto, Damiano Piovesan
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic acids research (2021)
Claudio Laquatra, Carlos Sanchez-Martin, Alberto Dinarello, Giuseppe Cannino, Giovanni Minervini, Elisabetta Moroni, Marco Schiavone, Silvio C E Tosatto, Francesco Argenton, Giorgio Colombo, Paolo Bernardi, Ionica Masgras, Andrea Rasola
HIF1α-dependent induction of the mitochondrial chaperone TRAP1 regulates bioenergetic adaptations to hypoxia. Cell death & disease 12 (5) (2021)
Damiano Piovesan, Andras Hatos, Giovanni Minervini, Federica Quaglia, Alexander Miguel Monzon, Silvio C E Tosatto
Assessing predictors for new post translational modification sites: A case study on hydroxylation. PLoS computational biology 16 (6) (2020)
Alexander Miguel Monzon, Marco Necci, Federica Quaglia, Ian Walsh, Giuseppe Zanotti, Damiano Piovesan, Silvio C E Tosatto
Experimentally Determined Long Intrinsically Disordered Protein Regions Are Now Abundant in the Protein Data Bank. International journal of molecular sciences 21 (12) (2020)
Alexander Miguel Monzon, Marco Carraro, Luigi Chiricosta, Francesco Reggiani, James Han, Kivilcim Ozturk, Yanran Wang, Maximilian Miller, Yana Bromberg, Emidio Capriotti, Castrense Savojardo, Giulia Babbi, Pier L Martelli, Rita Casadio, Panagiostis Katsonis, Olivier Lichtarge, Hannah Carter, Maria Kousi, Nicholas Katsanis, Gaia Andreoletti, John Moult, Steven E Brenner, Carlo Ferrari, Emanuela Leonardi, Silvio C E Tosatto
Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5. Human mutation 40 (9) (2019)
Tadeo E Saldaño, Silvio C E Tosatto, Gustavo Parisi, Sebastian Fernandez-Alberti
Network analysis of dynamically important residues in protein structures mediating ligand-binding conformational changes. European biophysics journal : EBJ 48 (6) (2019)
Maria Cristina Aspromonte, Mariagrazia Bellini, Alessandra Gasparini, Marco Carraro, Elisa Bettella, Roberta Polli, Federica Cesca, Stefania Bigoni, Stefania Boni, Ombretta Carlet, Susanna Negrin, Isabella Mammi, Donatella Milani, Angela Peron, Stefano Sartori, Irene Toldo, Fiorenza Soli, Licia Turolla, Franco Stanzial, Francesco Benedicenti, Cristina Marino-Buslje, Silvio C E Tosatto, Alessandra Murgia, Emanuela Leonardi
Characterization of intellectual disability and autism comorbidity through gene panel sequencing. Human mutation 40 (9) (2019)
Marco Carraro, Alexander Miguel Monzon, Luigi Chiricosta, Francesco Reggiani, Maria Cristina Aspromonte, Mariagrazia Bellini, Kymberleigh Pagel, Yuxiang Jiang, Predrag Radivojac, Kunal Kundu, Lipika R Pal, Yizhou Yin, Ivan Limongelli, Gaia Andreoletti, John Moult, Stephen J Wilson, Panagiostis Katsonis, Olivier Lichtarge, Jingqi Chen, Yaqiong Wang, Zhiqiang Hu, Steven E Brenner, Carlo Ferrari, Alessandra Murgia, Silvio C E Tosatto, Emanuela Leonardi
Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI-5 intellectual disability challenge. Human mutation 40 (9) (2019)
Laura Kasak, Constantina Bakolitsa, Zhiqiang Hu, Changhua Yu, Jasper Rine, Dago F Dimster-Denk, Gaurav Pandey, Greet De Baets, Yana Bromberg, Chen Cao, Emidio Capriotti, Rita Casadio, Joost Van Durme, Manuel Giollo, Rachel Karchin, Panagiostis Katsonis, Emanuela Leonardi, Olivier Lichtarge, Pier Luigi Martelli, David Masica, Sean D Mooney, Ayodeji Olatubosun, Predrag Radivojac, Frederic Rousseau, Lipika R Pal, Castrense Savojardo, Joost Schymkowitz, Janita Thusberg, Silvio C E Tosatto, Mauno Vihinen, Jouni Väliaho, Susanna Repo, John Moult, Steven E Brenner, Iddo Friedberg
Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants. Human mutation 40 (9) (2019)
Giovanni Minervini, Federica Quaglia, Francesco Tabaro, Silvio C E Tosatto
Genotype-phenotype relations of the von Hippel-Lindau tumor suppressor inferred from a large-scale analysis of disease mutations and interactors. PLoS computational biology 15 (4) (2019)
Pietro Sormanni, Damiano Piovesan, Gabriella T Heller, Massimiliano Bonomi, Predrag Kukic, Carlo Camilloni, Monika Fuxreiter, Zsuzsanna Dosztanyi, Rohit V Pappu, M Madan Babu, Sonia Longhi, Peter Tompa, A Keith Dunker, Vladimir N Uversky, Silvio C E Tosatto, Michele Vendruscolo
Simultaneous quantification of protein order and disorder. Nature chemical biology 13 (4) (2018)
Roxana Daneshjou, Yanran Wang, Yana Bromberg, Samuele Bovo, Pier L Martelli, Giulia Babbi, Pietro Di Lena, Rita Casadio, Matthew D Edwards, David Gifford, David T Jones, Laksshman Sundaram, Rajendra Rana Bhat, Xiaolin Li, Lipika R Pal, Kunal Kundu, Yizhou Yin, John Moult, Yuxiang Jiang, Vikas Pejaver, Kymberleigh A Pagel, Biao Li, Sean D Mooney, Predrag Radivojac, Sohela Shah, Marco Carraro, Alessandra Gasparini, Emanuela Leonardi, Manuel Giollo, Carlo Ferrari, Silvio C E Tosatto, Eran Bachar, Johnathan R Azaria, Yanay Ofran, Ron Unger, Abhishek Niroula, Mauno Vihinen, Billy Chang, Maggie Haitian Wang, Andre Franke, Britt-Sabina Petersen, Mehdi Pirooznia, Peter Zandi, Richard McCombie, James B Potash, Russ B Altman, Teri E Klein, Roger A Hoskins, Susanna Repo, Steven E Brenner, Alexander A Morgan
Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges. Human mutation 38 (9) (2017)
Alexander Miguel Monzon, Diego Javier Zea, María Silvina Fornasari, Tadeo E Saldaño, Sebastian Fernandez-Alberti, Silvio C E Tosatto, Gustavo Parisi
Conformational diversity analysis reveals three functional mechanisms in proteins. PLoS computational biology 13 (2) (2017)
Marco Carraro, Giovanni Minervini, Manuel Giollo, Yana Bromberg, Emidio Capriotti, Rita Casadio, Roland L Dunbrack, Lisa Elefanti, Pietro Fariselli, Carlo Ferrari, Julian Gough, Panagiostis Katsonis, Emanuela Leonardi, Olivier Lichtarge, Chiara Menin, Pier Luigi Martelli, Abhishek Niroula, Lipika R Pal, Susanna Repo, Maria Chiara Scaini, Mauno Vihinen, Qiong Wei, Qifang Xu, Yuedong Yang, Yizhou Yin, Jan Zaucha, Huiying Zhao, Yaoqi Zhou, Steven E Brenner, John Moult, Silvio C E Tosatto
Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI. Human mutation 38 (9) (2017)
Binghuang Cai, Biao Li, Nikki Kiga, Janita Thusberg, Timothy Bergquist, Yun-Ching Chen, Noushin Niknafs, Hannah Carter, Collin Tokheim, Violeta Beleva-Guthrie, Christopher Douville, Rohit Bhattacharya, Hui Ting Grace Yeo, Jean Fan, Sohini Sengupta, Dewey Kim, Melissa Cline, Tychele Turner, Mark Diekhans, Jan Zaucha, Lipika R Pal, Chen Cao, Chen-Hsin Yu, Yizhou Yin, Marco Carraro, Manuel Giollo, Carlo Ferrari, Emanuela Leonardi, Silvio C E Tosatto, Jason Bobe, Madeleine Ball, Roger A Hoskins, Susanna Repo, George Church, Steven E Brenner, John Moult, Julian Gough, Mario Stanke, Rachel Karchin, Sean D Mooney
Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges. Human mutation 38 (9) (2017)
Valentina Giorgio, Victoria Burchell, Marco Schiavone, Claudio Bassot, Giovanni Minervini, Valeria Petronilli, Francesco Argenton, Michael Forte, Silvio C E Tosatto, Giovanna Lippe, Paolo Bernardi
Ca2+ binding to F-ATP synthase β subunit triggers the mitochondrial permeability transition. EMBO reports 18 (7) (2017)
John-Marc Chandonia, Aashish Adhikari, Marco Carraro, Aparna Chhibber, Garry R Cutting, Yao Fu, Alessandra Gasparini, David T Jones, Andreas Kramer, Kunal Kundu, Hugo Y K Lam, Emanuela Leonardi, John Moult, Lipika R Pal, David B Searls, Sohela Shah, Shamil Sunyaev, Silvio C E Tosatto, Yizhou Yin, Bethany A Buckley
Lessons from the CAGI-4 Hopkins clinical panel challenge. Human mutation 38 (9) (2017)
Alessandra Gasparini, Silvio C E Tosatto, Alessandra Murgia, Emanuela Leonardi
Dynamic scaffolds for neuronal signaling: in silico analysis of the TANC protein family. Scientific reports 7 (1) (2017)
Layla Hirsh, Damiano Piovesan, Lisanna Paladin, Silvio C E Tosatto
Identification of repetitive units in protein structures with ReUPred. Amino acids 48 (6) (2016)
Robert D Finn, Teresa K Attwood, Patricia C Babbitt, Alex Bateman, Peer Bork, Alan J Bridge, Hsin-Yu Chang, Zsuzsanna Dosztányi, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Gemma L Holliday, Hongzhan Huang, Xiaosong Huang, Ivica Letunic, Rodrigo Lopez, Shennan Lu, Aron Marchler-Bauer, Huaiyu Mi, Jaina Mistry, Darren A Natale, Marco Necci, Gift Nuka, Christine A Orengo, Youngmi Park, Sebastien Pesseat, Damiano Piovesan, Simon C Potter, Neil D Rawlings, Nicole Redaschi, Lorna Richardson, Catherine Rivoire, Amaia Sangrador-Vegas, Christian Sigrist, Ian Sillitoe, Ben Smithers, Silvano Squizzato, Granger Sutton, Narmada Thanki, Paul D Thomas, Silvio C E Tosatto, Cathy H Wu, Ioannis Xenarios, Lai-Su Yeh, Siew-Yit Young, Alex L Mitchell
InterPro in 2017-beyond protein family and domain annotations. Nucleic acids research 45 (D1) (2016)
Damiano Piovesan, Giovanni Minervini, Silvio C E Tosatto
The RING 2.0 web server for high quality residue interaction networks. Nucleic acids research 44 (W1) (2016)
Damiano Piovesan, Francesco Tabaro, Ivan Mičetić, Marco Necci, Federica Quaglia, Christopher J Oldfield, Maria Cristina Aspromonte, Norman E Davey, Radoslav Davidović, Zsuzsanna Dosztányi, Arne Elofsson, Alessandra Gasparini, András Hatos, Andrey V Kajava, Lajos Kalmar, Emanuela Leonardi, Tamas Lazar, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Attila Meszaros, Giovanni Minervini, Nikoletta Murvai, Jordi Pujols, Daniel B Roche, Edoardo Salladini, Eva Schad, Antoine Schramm, Beata Szabo, Agnes Tantos, Fiorella Tonello, Konstantinos D Tsirigos, Nevena Veljković, Salvador Ventura, Wim F Vranken, Per Warholm, Vladimir N Uversky, A Keith Dunker, Sonia Longhi, Peter Tompa, Silvio C E Tosatto
DisProt 7.0: a major update of the database of disordered proteins. Nucleic acids research 45 (D1) (2016)
Lisanna Paladin, Layla Hirsh, Damiano Piovesan, Miguel A Andrade-Navarro, Andrey V Kajava, Silvio C E Tosatto
RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures. Nucleic acids research 45 (D1) (2016)
Jon Ison, Kristoffer Rapacki, Hervé Ménager, Matúš Kalaš, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan M Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gatter, Tatyana Goldberg, Marie Grosjean, Björn Grüning, Manuela Helmer-Citterich, Hans Ienasescu, Vassilios Ioannidis, Martin Closter Jespersen, Rafael Jimenez, Nick Juty, Peter Juvan, Maximilian Koch, Camille Laibe, Jing-Woei Li, Luana Licata, Fabien Mareuil, Ivan Mičetić, Rune Møllegaard Friborg, Sebastien Moretti, Chris Morris, Steffen Möller, Aleksandra Nenadic, Hedi Peterson, Giuseppe Profiti, Peter Rice, Paolo Romano, Paola Roncaglia, Rabie Saidi, Andrea Schafferhans, Veit Schwämmle, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger, Radka Svobodová Vařeková, Silvio C E Tosatto, Victor de la Torre, Paolo Uva, Allegra Via, Guy Yachdav, Federico Zambelli, Gert Vriend, Burkhard Rost, Helen Parkinson, Peter Løngreen, Søren Brunak
Tools and data services registry: a community effort to document bioinformatics resources. Nucleic acids research 44 (D1) (2015)
Damiano Piovesan, Manuel Giollo, Emanuela Leonardi, Carlo Ferrari, Silvio C E Tosatto
INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity. Nucleic acids research 43 (W1) (2015)
Emilio Potenza, Tomás Di Domenico, Ian Walsh, Silvio C E Tosatto
MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins. Nucleic acids research 43 (Database issue) (2014)

Silvio C E Tosatto.css-eqlu8i{font-size:small;padding-left:4px;} (Silvio Tosatto, Alessio Del Conte)

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Silvio C E Tosatto (Silvio Tosatto, Alessio Del Conte)