Inferring demographic parameters in bacterial genomic data using Bayesian and hybrid phylogenetic methods.
Sebastián DuchêneDavid A DucheneJemma L GeogheganZoe A DysonJane HawkeyKathryn E HoltPublished in: BMC evolutionary biology (2018)
Hybrid approaches can produce reliable inferences of evolutionary timescales and phylodynamic parameters in a fraction of the time required for fully Bayesian analyses. As such, they are a valuable alternative in outbreak studies involving a large number of isolates.